Coffea arabica (coffee): 113732144
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Entry
113732144 CDS
T11342
Name
(RefSeq) myosin-12 isoform X1
KO
K10357
myosin V
Organism
carb Coffea arabica (coffee)
Pathway
carb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113732144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113732144
04131 Membrane trafficking [BR:
carb04131
]
113732144
03029 Mitochondrial biogenesis [BR:
carb03029
]
113732144
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
carb04812
]
113732144
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
113732144
mRNA cycle factors
P-body specific factors
113732144
Membrane trafficking [BR:
carb04131
]
Others
Actin-binding proteins
Myosins
113732144
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
113732144
Cytoskeleton proteins [BR:
carb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
113732144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
AAA_22
TSC22
nSTAND3
AAA_6
Pox_A_type_inc
AAA_16
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
113732144
NCBI-ProteinID:
XP_071936246
UniProt:
A0ABM4WWS6
LinkDB
All DBs
Position
2e:complement(25548567..25560978)
Genome browser
AA seq
1585 aa
AA seq
DB search
MGTPVNIIVGSHVWAEDPEVAWIDGEVTEIRGNDATIVTTSEKTIVAPISSIYPKDTEAP
PAGVDDMTKLAYLHEPGVLYNLACRYALNEIYTYTGNILIAVNPFRRLPHLYDVNMMEQY
KGAAFGELSPHLFAVADTCYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRS
GTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKHGKISGAAVRTYLLE
RSRVCQVSDPERNYHCFYMLCASPPEDVKKYKLGDPRTFHYLNQTNCYEVANVDDAREYL
ETRKAMDVVGINQDEQEAIFRVVAAILHLGNIDFIKGKDVDSSKVKDEKSLYHLQTAAEL
LMCNEKALEDLLCKRVIVTPDGNITKPLDPAAAATSRDALAKTIYSRLFDWIVDKINSSI
GQDPEAKSIIGVLDIYGFETFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTREEID
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKL
ARTDFTINHYAGDVIYQADQFLDKNKDYVIAEHQDLLTASKCPFVANLFPSLPEETSKQS
KFSSIGTRFKQQLQSLMETLNTTEPHYIRCIKPNAVLKPGIFENYNVLNQLRCGGVLEAI
RISCAGYPTKRTFDEFLDRFGMLAPDVLDGYEEKSACIAICDRMGLKGYQIGKSKVFLRA
GQMAELDARRAEILALAARRVQRQIRTHLTRKEFITLRKAAIDTQKLWRAQIARRLYDFV
RKEAASIRIQKHERARAARKSYTTLKAAVTVIQTGMRAMAARNEYRQRRRNKAATAIQTQ
WRRFHAVTAYNQQKKATLTLQCLWRARIARKELRKLRMAARETGALKEAKDKLEKRVEEL
TWRLEFEKHLRIDLEEAKGLEITKLQNTLQEMQAQLDEAHAAIIHEKEAAKIAIEQAPPV
IKEVPVVDNSKVEMLTDQNKELQHNEYSCWACILDKESFHMQEEIAELNKRVAEFEQTYS
EVQKESQARLREAEESQLRVLQLQETIGRLELNLSNLESENQVIRQQALAAPATEEFIEE
MEILKRKISDLESENETLRSQNVVVEPTSISDGECSTVKSLDNGLKISNGPQTEEDHERK
MPEQQLAKDSSNVVPFLTKQRSLTDKQQENHDILIKCLVEDKRFSESRPVAACIVYKALL
HWRSFEADKTTIFDRIIHTIRSSIEDQDNSKVLAYWLSTTSTLLLLVQHTIKASNTPNIV
SHRNRSPPSTFFRRMAQGFREPSIRTETSSGYSGMEGNSNMRSRIEAKYPALLFKQHLTA
CVEKIYGMIRDNLKKDIGPFLNLCIQAPRSARTRVLRGSSKTIHSNSIAKQQASNVHWQN
IVNNLDHTLSILSENNVPSVLIRKIFNQVFSFINVQLLNSLLLRRECCSFSNGEFVKAGL
QELENWCIKVTEKFTGSSWDELQHIRQAVGFLVSHQKAQKSLEDMTNEICPMLSIAQIYR
IGTMFWDDKYGTHGLSPEVIGKMRALTVEDSTMSNNIFLLDVDSSIPFSVEEISQSFHDM
RLSDLDPPLLLRQRSDFHFLLQQTD
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcctgtaaacatcatagttggatcccatgtctgggctgaggatcctgaagtt
gcctggatagatggagaagttacagaaatcaggggcaacgatgccaccatagtcacaaca
agtgagaagacgatagttgcacccatttccagcatataccccaaggacactgaagcacca
ccagccggggtcgatgacatgaccaaattagcttacctccatgagcctggagtactctac
aaccttgcatgccgttatgctctaaatgaaatatatacttacactgggaacattctaata
gctgtgaaccctttccgaagacttccacatttgtatgatgtcaacatgatggagcagtat
aaaggagctgcttttggagagctaagtccccatctttttgctgttgcagatacctgttac
agatcaatgataaatgaacagggaagccagtctatcttggtaagtggagaaagtggagct
ggaaaaactgagacaacaaaaatgctaatgagatatcttgctttcatgggtggtagatca
ggtactgaaggaagaacagttgaacaacaagttcttgaatccaaccctgttttggaagca
tttggcaacgctaaaactgtgaaaaacaacaactcaagtcgttttggtaaatttgtagaa
atccaattcgataagcatggaaaaatctctggggctgcagttcgaacatacctacttgaa
agatcacgtgtttgccaagtttctgatccagaaaggaattaccattgtttttacatgctt
tgtgcatcacctcctgaggatgtgaagaaatacaaacttggagacccaagaacattccac
tatctgaaccaaacaaattgttatgaagtggcaaatgtagatgatgcaagagagtatcta
gaaaccaggaaggccatggatgttgttgggataaaccaggacgaacaggaagctatattc
cgagtggttgctgcaatacttcatctggggaacattgacttcatcaaagggaaggatgtt
gactcttcaaaagtgaaagatgagaaatcactctatcatctccagacagctgcagagtta
ttaatgtgcaatgagaaggcactggaagacttgctctgcaagcgtgtaatagtaactcca
gatggaaacatcaccaaaccactggatccagctgcagctgccactagtcgtgatgctctg
gcaaagaccatatactccagattgtttgattggattgtggacaagataaatagctccatc
gggcaagatcctgaagcaaaaagcataataggagttcttgatatatatggctttgaaacc
ttcaaaatcaacagttttgagcagttatgcataaacctgacaaatgagaagttgcagcag
cattttaatcagcatgtattcaagatggaacaagaagaatacacaagggaggaaattgac
tggagttatgtagaatttgtagacaatcaagatgttctggatcttattgagaagaaacct
ggtggcataattgcacttcttgatgaagcctgcatgtttcccaagtcaactcatgagaca
tttgcacagaagatgtaccagacatacaaagcacacaaacgcttcagcaagccaaaacta
gctcgaactgatttcacaattaatcattatgctggtgatgttatttaccaagcagatcaa
ttcttagacaaaaacaaggattatgttattgcagaacatcaagatctattgactgcctca
aaatgcccttttgttgcaaatctctttccgtctttaccagaggaaacatctaagcaatcc
aagttttcttccatcggtacccgctttaagcaacagctacaatctttaatggaaaccttg
aatacgacagagccacattatatcagatgcataaagcctaatgcagtgttgaagccaggg
atattcgagaattacaatgtcttaaaccagttgagatgtgggggcgtcttagaggcaatt
aggataagttgtgcaggatatccaacaaagagaacattcgacgagtttcttgaccgcttt
ggtatgttagctccagatgttctagatggatatgaggagaaatcagcatgtattgcaatt
tgtgacagaatgggcttaaagggctatcagattggcaaaagtaaggtatttctcagagct
gggcagatggctgagctggatgctcgaagagctgaaattctggctcttgcagcaaggcga
gtccaaaggcaaatccggacacaccttaccaggaaggagttcattactctacgaaaggca
gcaattgatacccaaaaactttggagagcacaaattgcacgtagactttatgatttcgtg
aggaaggaagcagcttcaatccgcatacaaaaacatgaacgtgctcgtgcagcaagaaaa
tcttacacaacactaaaagcagcagtaacagtcattcaaacaggaatgcgagcaatggca
gctcgaaatgagtacagacagaggagacgaaacaaagcagcaactgctattcagacacaa
tggcgaagattccatgcagttactgcctataatcagcaaaagaaagcaactctcactctt
caatgcctctggagagctagaatagcaaggaaggagcttcggaaactgagaatggctgca
agggaaacgggagcactaaaagaagcaaaggacaagctagaaaaacgtgtagaagagctg
acatggagattagaattcgaaaagcacttaaggattgatctcgaagaagccaagggacta
gagattaccaaattacaaaatacattgcaggaaatgcaagcacaactagatgaagcacat
gcggcaatcatacatgaaaaagaagcagcaaaaatagcaattgagcaagccccaccagtc
atcaaagaggtaccagttgtggacaacagcaaggtagagatgttgacagaccaaaataag
gaacttcagcacaacgaatatagttgctgggcatgtatccttgacaaagagagttttcac
atgcaggaagagatagcagaattaaacaaaagggtagcagaatttgagcagacatactct
gaagtgcagaaagagagccaggccagacttagagaggcagaggagtcacaactcagggtt
ttgcaacttcaagagacaattggaagactagagctcaacttatcaaaccttgaatctgag
aatcaggttatccgccaacaggctttggctgcgccagctactgaggaatttattgaagaa
atggaaatactcaagagaaagatcagtgacttggagtcagaaaatgaaacccttcgcagc
caaaatgttgtggtggagccaacatcaatttctgatggggaatgttccacagtaaagagt
ttggacaatggattgaagatcagtaatggacctcaaacagaggaagatcacgaaaggaaa
atgcctgaacaacaattagccaaggattccagcaatgttgttcccttcctgactaaacaa
agatccctcacagacaagcagcaggaaaaccatgatatcctgatcaaatgtctcgtggaa
gataagagatttagcgaaagcagaccagttgctgcctgcattgtgtacaaagcactactt
cactggagatccttcgaagcagacaagacaacaatatttgacaggattattcatactatc
cgatcatcaatagaggatcaggacaactctaaagttctagcatattggttgtcaaccact
tcaactcttttgcttctggtgcaacatacaattaaagcaagtaatacaccaaatatagta
tctcatcgtaacaggagtccgcccagcactttcttcagaagaatggcacagggttttcgt
gaaccttcaataaggacagaaacttcaagcggttacagcggaatggaaggaaactcaaat
atgcgatctagaatagaagctaaatacccggccctgttgtttaagcaacatcttactgca
tgtgtcgaaaaaatatatggcatgatccgtgacaacttaaagaaagacattggtcctttc
ctcaacttatgtatacaagcaccaagatctgcaaggaccagagtgctgagagggtcgtct
aaaactatccattccaattccattgcaaagcaacaggcgtccaatgtacactggcaaaat
attgtcaacaacttggatcataccttaagcatactctctgaaaacaatgtcccttctgtt
cttataaggaagattttcaatcaggtattttccttcatcaatgttcagctcctcaacagt
ttattgctccgtcgtgagtgttgctcattcagcaatggggaatttgtgaaggcaggtttg
caagagctggaaaattggtgtattaaagtaacagaaaagttcactggatcatcttgggat
gaacttcagcacataaggcaagcagtggggttcttggtttcacatcaaaaggctcaaaag
tccttggaggacatgacgaacgaaatatgtccgatgttgagcatcgcgcaaatatatcgc
attgggacaatgttctgggatgacaaatatggaacacatggcttgtctccagaagtaatt
ggcaagatgagagcattaacagtggaagattcaacaatgtcaaacaatattttcttgctt
gatgtggattcaagcatacctttctccgttgaagagatatcacaatccttccatgatatg
aggctgtctgatttggatccacctttgctccttcgccaaagatctgatttccattttcta
ttgcagcaaacagattaa
DBGET
integrated database retrieval system
