Coffea arabica (coffee): 113732202
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Entry
113732202 CDS
T11342
Name
(RefSeq) sister chromatid cohesion 1 protein 3 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113732202
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113732202
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
113732202
NCBI-ProteinID:
XP_027113660
UniProt:
A0A6P6WEX9
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Position
2e:complement(26624335..26630869)
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AA seq
672 aa
AA seq
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MFYSQSFLARKGPLGTVWCAAHLQHKLKKSHYTSTSIKDTVDLILVPQVPIALRMSGHLL
LGVVRIYSKQVDYFYQDCNVALVEILKAFSSVNTNINLPEGATQAPYHSITLPETLALDK
IDLEDYSDLERSEDDHRGRREEITLEDQEPTGRDPHEPTRFTEDVGRGSPDLEETTVSGL
KPVEEDSRPSVPEDITVVIGDPSPSNQGGLNEKPGRDSTTQELPDIEVMRDAVHDFRMED
APVWPDQGYDVELDRVLEEQIMKLTEASSPVVEEILVSGGPTMPLPQAEEPQCVASEQAH
ENFNLDIPFGHASPGLAIRSTPPVEQPRAKQRKKRSRDFYDEQTVLTNKSMKKALEDSSD
LLRKKRDCPSSNLDMWKSQKRLKKDRVFLEPLITGLSADLVSIYKKEVISSKPHLVGSEE
PHLQPRDAQIPTPGGDKEMEIENLRNYVGPSGGNEMFNILPSPNRFISSPTMSMASPIRR
GESTPATTNFGSEPDRLETTIGTDVQTTPDLAASSGPFGSDMETPATLLGGALGVENTVL
SDIPEMLNSAGDLSFLEQDEKTPGGTPRTPESDHLTRKQMGTPEFDILSARTRAVAQYLR
RQSSVATNSEELSGILSLNSILEGKTRKISARMFFETLVLKNYALVDVNQEEPYSDIALK
VTSKLIKEKFPS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcacaatcatttctggcaagaaaagggcccttagggactgtttggtgcgca
gcacatttacagcacaagctcaagaaatctcactacacctccactagcatcaaagataca
gttgacctgattctggttcctcaggttcctattgctctaaggatgtcaggccatcttcta
ctaggtgttgtccgtatttattccaagcaagttgactatttttatcaagattgcaatgtc
gcattggtggaaatactcaaggcattttcttctgtaaatacaaatatcaatctgccagag
ggtgcaactcaagcaccatatcactctatcactctgcctgaaacacttgcacttgataaa
attgacctggaagattattctgatctggagaggtctgaggatgatcatcgtggaagacga
gaggaaatcacacttgaagaccaagagccaacaggaagagatccacatgaacccactaga
ttcactgaggatgtggggaggggttctccagatttggaagagactacagtgtctgggctc
aagcccgtggaggaagattctcgtccttcggttccagaggacattacagtagtgattgga
gatccttctcccagcaatcagggaggattgaatgaaaaacctggaagagatagtaccact
caggagctcccagatattgaagtcatgcgtgatgctgtacatgactttcgaatggaagat
gctcctgtatggccagatcaaggctatgatgtggaacttgacagagtgctggaggagcag
atcatgaaacttactgaagccagcagtccagtggtggaggaaatattggtttctggaggt
cctactatgccattacctcaagctgaagaacctcaatgtgttgcttcagagcaggcccat
gaaaattttaatctagacattcccttcgggcatgcatcacctggactagcaattcgatca
acacctccagttgagcagccaagagcaaagcagagaaaaaaaaggagcagggatttttat
gatgaacaaactgtactgactaacaagtctatgaagaaggcgctagaagattccagtgat
ttgctaagaaaaaaaagggattgtccttcttctaatttggacatgtggaagtcacagaag
agattgaaaaaggacagagtctttcttgagcctttaataactggattatcggccgacctg
gttagcatttacaagaaagaagttatttcttcgaaacctcacttagttggctcagaggaa
cctcatctccagcctagagatgcacaaataccgacacctgggggtgacaaagaaatggaa
attgaaaatctacgcaactatgtaggtccttctggtggcaatgagatgtttaatatcttg
ccttcccctaatagatttatttcatctcctacgatgtccatggcttctccgatcagaaga
ggcgaatccacaccggccactacaaattttggttcagagccggatcggttagaaacaact
attggcactgatgtacagactaccccagatttagcagcatctagtggaccttttggttcg
gacatggaaactccagcaactcttttaggcggggcactaggagtggagaacactgttctt
tctgatatccccgagatgctaaattctgctggggacttgagcttcctagaacaagatgaa
aaaactcctggtgggactccaagaactccagaatcagatcacttgacaagaaaacaaatg
ggaaccccggagtttgacatattgtcagcaaggacaagagctgtggcccaatatttgaga
aggcagtcatcagtagccaccaactctgaagaattgtctggaattctgagcttgaactca
atattggaaggcaagaccagaaaaataagtgctcggatgttttttgaaacactagtttta
aaaaattatgcacttgtagacgttaaccaagaagaaccttatagtgatattgctttgaag
gtgacttcaaaactcataaaggaaaaatttccgagctaa
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