Coffea arabica (coffee): 113732506
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Entry
113732506 CDS
T11342
Name
(RefSeq) CSC1-like protein At3g54510 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carb02000
]
113732506
Transporters [BR:
carb02000
]
Other transporters
Pores ion channels [TC:
1
]
113732506
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
113732506
NCBI-ProteinID:
XP_027114125
UniProt:
A0A6P6WG38
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All DBs
Position
2e:38467877..38484839
Genome browser
AA seq
706 aa
AA seq
DB search
MKAENLLASASINIGVAMFILSLFSILKKQPSNAPIYYPRPISLNHHIFLDERFTFSRFL
PSLEWVRRASRVSEGQILQQCGLDVLVFIRLFKFGINFFTVSCVVGVLVLLPLNYIDGDR
LSSQFHSVNSFTISNIKGGSNRLWVHLSCLYFISCYGLYLLYKEYKDIWLKRIQQLHNLR
HRPDQFTVLVREIPFCNEHKAYGCCVDHFFSKHYPSSYQSYQILYDCEELEKLLIHGKSI
RETIEKLTQQSLTNRYTRRSDSSKIEILKEMLQDVCRKIRHIRGEAMLSEKELPVAFVTF
RSRLGAALAAQSQQHSNPLVWITGIAPEPRDVLWSNLAIPYRHLPLHEIVVFLLASLLTI
FFAIPVTAIQGIAKFEKLRKWFPPAMAVQLIPGLRSIVTGYLPSVILNFFIYIVPFCMIA
MAQMAGYISRSKKDIKACNMVFYFLVGNAFFLSLLSGSLLDQIGESFTHPKDFPGHLASA
VSAQADFFMTYILTNGLFGFSLEILQPGLFMWNYIKSHTWHRGKRKTAYLNSIPYYRIIP
FVALSILIGMVYAIISPLLLPFLVGYFLLGYVVFINQIEDVYITYYETCGQYWPCIYQYI
LVALILMQITMVGVFGLKSKPSASISTIPLLLLTFSFNEYCKRRFVPTFHKYSMQDAKKN
DELDEQNGLMEANLQNALDAYCPPCLRPVDFEVVESCSTQPLISPK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagaaaatttgctggcatcagccagcatcaacataggagtagccatgttcatc
ctttcacttttttccatactgaaaaagcagccttcaaatgcaccaatatactatccacgt
cccatttctctgaatcaccatatctttttggacgagcgttttaccttttcccgatttctt
ccctcactggaatgggttcgtcgcgcatcgcgagtttccgaagggcagattcttcagcag
tgtggtcttgacgtgctcgtcttcattagactgtttaaattcgggatcaattttttcact
gtttcctgtgttgttggtgtattggttttgcttccacttaactatattgacggtgacaga
ctatcttcacaatttcattcagtgaattctttcacaatatctaatattaaaggaggttct
aacaggctgtgggtgcatctttcttgcttgtattttatatcttgctatggattataccta
ttgtacaaggaatataaagatatctggttgaaaaggattcagcagctacataacttaagg
catcgaccagatcaattcactgtcctagttcgagagatccctttttgcaatgagcacaaa
gcttatggttgctgtgtggatcactttttttctaaacactatccatcttcttatcaatca
tatcagattctgtacgactgcgaggaactcgaaaagttgctaattcatggcaaatcaatc
agagaaacgattgagaaattgacacagcagtcattgactaatagatatacaagacgatca
gatagctcaaaaatagaaatactcaaagaaatgcttcaagatgtgtgtcgtaagatacga
cacataaggggtgaggcgatgctttcagaaaaggagttgcctgttgcatttgttacgttc
aggtctcgcttgggtgctgcattagctgcccaatctcaacagcactcaaatcctctagta
tggatcacaggaatagccccagaaccaagggatgttctctggagtaatttggcgattcct
tatcgacatctgccgctgcatgaaattgttgtcttcttgttagcatcacttctcacaata
ttctttgccatccctgtcacagctattcaaggaattgcaaaatttgaaaaattacgaaaa
tggtttccacctgcaatggcagtgcaattaataccaggactaagatccattgtgacaggc
tatcttccaagtgtgattctgaatttttttatttacattgttcccttttgcatgattgct
atggcacaaatggcgggttatatttcaaggagtaagaaggatataaaagcttgtaatatg
gtcttctattttcttgtgggaaatgcattcttcttaagcttattatctggatccttacta
gaccaaattggggaatctttcactcatcctaaagattttcccggtcatctagccagtgct
gtttctgcccaagcagactttttcatgacatacatcttgacaaatgggctgtttggattt
tctttagagattctccaaccaggattattcatgtggaactacataaaatcccacacatgg
caccgcggaaagaggaaaactgcatatctcaactcaataccttattaccgaattattcct
tttgttgctctctctatactgattggcatggtatatgcaattatctcgcccttgcttctg
ccatttctagttggctacttcctgctaggctatgttgttttcattaatcagattgaagat
gtttatataacttattatgagacatgtggtcaatattggccatgcatttatcagtacatt
cttgttgctctcatcctaatgcaaataactatggttggtgtctttggactgaagtcaaag
ccctccgcatccatttctacaattcctctacttcttctcactttcagttttaatgaatac
tgcaagaggcggtttgttccaacatttcacaaatactctatgcaggatgcaaagaaaaat
gatgaacttgatgagcaaaatggtttgatggaggctaacttacaaaatgcacttgatgct
tattgccctccttgtttgcgacctgttgactttgaagttgttgaatcttgctcgacacag
ccattaatatccccaaaatga
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