Coffea arabica (coffee): 113732566
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Entry
113732566 CDS
T11342
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a-like isoform X1
KO
K14972
PAX-interacting protein 1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113732566
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
113732566
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113732566
NCBI-ProteinID:
XP_027114217
UniProt:
A0A6P6WKH7
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Position
2e:complement(54548258..54559606)
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AA seq
1396 aa
AA seq
DB search
MDSNSWRAPQGQMAQGPPQGGQVGGSGEVSAVPNPAPPATIDSGDWRTQLQADSRQRIVN
KICAHMCRMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQSDYLRKISLKMLTME
TKSQNPMANPLQANAANASKNPPDQAVHGMQSQIHNQPLPMPVVSSQSQSRQQLLPQNMQ
TNMTSTGVQNSAILASTLPTAGNLQQAPMPNIGQNSNLQNMQSVPSVSQNPVGSSMGQVM
PSNVFTNSQRQMQARQQQVVPLQQHQQTQNPQHYLYQQQLQHQYMKKKLQQGGGMAQPLM
QSHIQQQQQQQQQNLLQPTQIQTSQQAVMQPSVMQSAPLSGLQQNQQSSMQQLTQPVIQQ
QSQAVLRQQQQQQQQQQQQSQQASMLHQQQTSMAQQPLLPAAQQPQQQQQQLIGQQPGAT
NIQHNQLIGQQNSMPDMQQQQQRLIGQQNNMQQQQQLIGQQNSLSSMHQQQLAPQSSVSG
LHQQSMLGTQPGNSALPTSQHSVIMLQQSKVAIQQQMQQNATALLPSQNQQPQQPQQQMV
SQIQAQPGGLQHMQQQSNALQRDMQQKIQPTGSLLQQQNVVEQQKQLFQPQRAHPEASST
SLDSTAQTGNASGGDWQEEVYQKIKSMKDMYFLELNDMYMKIAGKLQQHDSLPQQPRNEQ
LEKLKFFKLMLERLIGFLRCTKNDIQISHKEKLASIEKQIINILTTNRPRRPVSLQQVQL
AQQQMSNMQHSQPQTQIPQIQPQENQMNQQMQPMNVQSSITPMQPNSLTSLQQNTLSSVP
PVSNLQQNMMSTLQPASTLDPGQSNTHPLQQVAISSLQQNTASGPQTMNINSLSSQSGMT
ALQSNLNNALQPNSTMIQNQQLKQQEQQMLQTQQLKQQLHPRQMQQQLLQRQQLMQQQQQ
QQQQQQQQHQQMKPQQQPSQLPGHQMSPLHQVTDSSDLKVRPQISVKSSVFQQHHTNSQR
AAYHHQQLKSGSPFPISSPQVLQAASPQVPPHASPQIDQQSMLTSIAKTGTPLQTANSPF
VVPSPSTPLAPSPMPGESEKLNSGISSLSNAGNIGPSHATTVSAAAQSLAIGTPGISASP
LLAEFTSLDGAHVNTSTAMPCKPHTVEKPHERLIKAVKSISNKALVASIDDISSVVSMVD
RIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFFTQDGPTGTKKMRRSTSAMPSNVVSSVG
SVNDSMRQLNGSDAFELESTATSSIKRARNEANHALVEEIHEINRRLIDTVVDISNEDVD
PTAVAAAADGGEGTIVKCSFSAVALSPNLKSQYASARTSPIQPLRLLIPTNYPDSSPILL
DKFPVEVSKEYEDLSIKARSKFSISLRSLSQPMSLLEMARTWDICARAVISEFAQQSGGG
TFSSKYGTWENCVSAV
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaacagttggagggcgcctcaaggccagatggctcagggtccacctcaaggt
ggtcaagtaggcggcagtggagaagtatcggctgtcccaaatccagctccgcccgctact
attgacagcggcgattggaggactcaactccaagctgattctcgtcaaagaatcgtaaat
aagatatgtgctcacatgtgcagaatggagactttgaagaggcatctgccattctctgga
caagagggactgcaagaacttaagaaaattgctgtgaggtttgaggaaaagatttatact
gcagcaactagccagtcagattatctgagaaagatatctttgaagatgctgacaatggaa
actaagtcccaaaatcccatggctaatccgctacaagctaatgctgccaatgcaagcaaa
aatcctccagaccaagctgtccatggcatgcaatcccaaattcataaccagccacttccc
atgccagtggtgagcagccaatcacaatcccgacaacagctgttaccacaaaacatgcag
actaatatgacatcaactggagtccagaattctgctattttggcttctacacttccaact
gctggtaatttgcagcaggctcccatgcctaatattggtcagaactccaatttgcagaac
atgcagagtgttcccagtgtttctcagaacccagtagggagttccatgggacaggtgatg
ccttcaaatgttttcactaattctcaaagacagatgcaggctagacaacaacaggttgtt
cccttgcagcaacaccagcagacacagaatccacagcattatctttatcaacaacagctg
cagcatcagtacatgaaaaaaaagttacaacaaggaggaggaatggcacagccccttatg
caatctcatatccagcagcagcagcagcagcagcagcaaaatcttttgcaaccaactcaa
attcaaacctcccagcaagctgttatgcagccatctgtaatgcagtcagctcctctatct
ggcctccagcagaatcaacagtcttctatgcaacaactgactcaaccagtaattcagcag
cagtctcaagcagttttgaggcagcagcaacagcaacagcaacaacagcagcaacagtcg
caacaggcttccatgttgcatcagcagcaaacctccatggctcaacagccattactgcct
gcagcacagcagccacagcaacaacagcagcagctgattgggcagcagcctggtgctaca
aatattcaacacaaccagctcattggccaacagaatagcatgcctgatatgcagcaacag
caacaaaggctgataggccagcagaacaatatgcagcagcagcagcagctaataggtcaa
cagaacagcctttcgagtatgcatcaacaacaattggcccctcaaagtagcgtttctggg
ctccatcagcagtcaatgctagggactcaacctggtaactctgccctgccaacaagtcag
cattctgtcatcatgttacagcaatctaaggttgcgatacagcaacaaatgcagcagaat
gcaacagcattgctaccaagccaaaatcaacagccacagcaaccgcagcaacagatggta
tcacagattcaagcacaaccagggggcctacaacatatgcagcagcagtcaaatgcgttg
caaagagatatgcagcaaaagattcaacctacaggttctttgcttcaacagcagaatgtt
gtagaacagcagaagcagttatttcagccacaaagagcccatcctgaggcatcatcaact
tcgttagattcaacagctcagacggggaatgcaagtggtggagattggcaggaggaggtt
tatcaaaagattaaatccatgaaggacatgtatttcctggaattaaatgacatgtacatg
aaaattgctggaaagctgcaacagcatgattctcttcctcaacaaccgagaaatgagcag
cttgaaaagctcaaattctttaagctcatgctggaacgcctaataggattcttgcgatgt
accaagaatgacattcagatcagtcacaaggagaagttggcttccattgaaaaacagata
atcaatattcttactacaaatcggccccggaggcccgtttctttgcaacaagtgcaactt
gcccaacagcaaatgtccaacatgcagcactctcagcctcagactcaaattcctcaaata
cagccccaggaaaatcaaatgaaccaacagatgcagccaatgaatgtacagagttccata
acaccaatgcagccaaatagcttgaccagcctgcagcagaacacattgtcctctgtgcca
ccagtttcgaatttgcaacagaatatgatgagtaccctacagcctgcttcgactttggac
ccaggacaaagtaatactcacccattgcagcaggtagctataagctctttacagcagaat
actgccagtggtcctcaaacaatgaacataaattctttatcatcgcaaagtggcatgact
gcgctgcaatcaaacctcaataatgctctacagcctaattcgactatgattcagaaccag
cagcttaaacaacaggagcagcaaatgttgcaaacccagcaattgaaacaacaattgcat
ccccgtcagatgcagcagcagcttttgcaaagacaacagctaatgcaacaacaacagcag
caacaacaacagcagcagcaacagcaccaacaaatgaagccacagcagcagccttcacag
ctgcccggacaccaaatgtcaccactacatcaggtaactgattcaagtgacttgaaggtg
agaccgcagataagtgttaaatcaagtgttttccagcaacaccataccaacagccagcga
gcggcatatcatcaccaacagttgaagtcgggaagcccatttcctatttcttcaccacaa
gtccttcaggcagcatcgcctcaggttccccctcatgcttcgcctcaaattgatcagcag
agtatgctgacatctatagcaaaaactggaactccattgcagactgcaaattcacccttt
gtggtcccatctccttcgactcccttggctccgtcacctatgcctggcgagtcagaaaaa
ctaaattctggcatttcatccctctcaaatgctggaaatattggaccctcgcatgcaact
actgtgtctgcagcagcccaatcactagcaattggcactcctgggatatcagcttcgcca
ttgcttgcagaatttacgagtttggatggagctcatgtcaacacatcaactgcaatgcca
tgcaagccacatactgtcgagaagccacatgaacggttgattaaagcggtaaaatcaatt
tcaaataaagcattggttgcctccattgatgatataagctcagttgtcagtatggttgat
aggatagctggatctgcaccaggcaatggatcaagagctgctgttggtgaggatttggtc
gcaatgacaaaatgtcgcttgcaagcaagaaactttttcacacaagatggacctactgga
acaaagaaaatgaggcgctctacgagtgcaatgccttccaatgttgtttcatctgttggt
agtgtgaatgacagtatgaggcagttaaacggttctgatgcctttgaattggaatccaca
gctacatcaagtatcaaaagggcaaggaatgaggccaaccatgcccttgtggaagagata
catgagataaatcgacgcctcatagatactgtggttgatatcagcaatgaagatgttgat
ccaactgcagtagctgctgcagctgatggtggtgaagggaccattgtcaagtgctctttc
agtgctgtagctcttagcccaaacctgaaatcacagtatgcttcagcacggacgtcacca
attcagcctctgcgattgctcattccaactaattatcctgattcctctcctatactcttg
gacaagtttccagttgaagttagtaaagagtatgaagatctttctattaaagccaggtcc
aagttcagtatatcactgagaagtctttcacagcctatgtcacttttggagatggcaagg
acgtgggacatttgtgctcgtgcagttatttcagaatttgcacaacaaagtggtggagga
actttcagctcaaaatatgggacttgggagaactgtgtgagtgcagtttag
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integrated database retrieval system
