Coffea arabica (coffee): 113732635
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Entry
113732635 CDS
T11342
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 14-like
KO
K15156
mediator of RNA polymerase II transcription subunit 14
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113732635
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
113732635
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Med14
Motif
Other DBs
NCBI-GeneID:
113732635
NCBI-ProteinID:
XP_027114352
UniProt:
A0A6P6WKX1
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Position
2e:complement(63050729..63067116)
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AA seq
1818 aa
AA seq
DB search
MAELGQQTVDFSTLVARAAEESYVSLKELVEKSKGSDISDSEKKIGILKYVVKTQQRMLR
LNVLAKWCQQVPLIQYCQQLESTLSSHDTCFSQAADSMFFMHEGLQQARAPIYDVPSAVE
VLLNGTYHRLPKCIEDVGTQSTLNVDQQKPALMKLDALVRSKLLEVSLPKDITEVKISDG
TVLLRVDGEFKVLVTLGYRGHLSLWRILHLELLVGERSGPVKLEELQRHALGDDLERRMA
AVEDPFMTLYSILHELCVALVMDTVIRQVQALRQGRWKDAIKFELISDGSMGQGGNAGGT
QITPDGEADAAGLRTPGLKILYWLDFDKTSSTPDVGSCPFIKIEPGPDLQIKCLHSSFVI
DPVTGKEAEFSLDQSCIDVEKLLLRAICCNRYTRLLEIFKELEKNNQIVRAPGDVRLETQ
MDKFDSDGKKDISKFDSRKDEGQEVLLVRAYGLSFFTLGINLRNGRFLLHSSKNTVSPSE
LLECEEALNQRTMTAAQVFMSLRSKSISHLFACVGRSLGLEVFERGFASLKLPKNISNGS
SVLLMSFPECGSYYLLMQLEKDFKPLFNLIETQPDPSGKAESFSDLNNIIRVKDVDIGQM
QMCEDDLNLSLLDCGKLLSVLPSLSPNRTSEQSLLSEFTLEGSALASSFPSKFSSIVDEI
FELEKGSSAANLSGQGPSLGSTYGTSPASHFGAGGMNLHSTKVGTPSPKWDGGSQVPTRL
SGMPPSYSGSIYTGSHYRGLIQSGSTGSISVGPGRSQVKNLSSSKSDQDLTSLRSPQSGG
LGSYSLIDEHQITTPGIRTAGHLSPSPQLGLPASGASAKPIGARNSSGNAIPGNLRVSGF
NSLVASPVSQTPDSNCMNSNLDTVPRQEKMSRKRTLTDLLSSLPSLQHLEANDKSYKRRR
IVEWRPQQLTSQMLITSELFRKTEGYSYGDLISEANKGNLPSSIYVSALLHVVRHCSLCI
KHARLTSQMDALEIPYVEEVGLRSASSNLWFRLPFARGDTWQHICLRLGRPGSMYWDVKI
CDQHFGDLWELQKGMSNSPWGPGVRIANTSDVDAHIRYDAEGVVLSYHSVEADSIRKLVA
DIERLSNARTFALGMRSLLGVRTDEKFEENATASDVKAPGGVKTVLDMADKFSEQMRRAF
KIEAVGLMSLWFSFGSGVLARFVVEWESGKEGCTMHVSPDQLWPHTKFLEDFINGAEVAS
LLDCIRLTAGPLQALAAATRPARAAPVSGVSGVAAPISSMSRQSGYVPSQGQLPSIATPN
ASQAASVPAGNASASVTSGPLASQNPHTTAMLAAAAAAAAGRGGPGIVPSSLLPIDVSVV
LRGPYWIRIIYRKNFAVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQ
ELNGIDSSFAGGQQTVVLANGSSSNPSTVSQLSASNGNRTNLANSAGISRSANAVSGLNR
MGNAVPAGSNLAAANSGLPLRRSPGTGVPAHVRGELNTAIIGLGDDGGYGGGWVPLVALK
KVLRGILKYLGVLWLFAQLPELLKEILGSILKDNEGALLNLDQEQPALRFFIGGYVFAVS
VHRVQLLLQVISVTRFHHSQRQQQNSATAQDELTPSEISEICDYFSRRVASEPYDASRVA
SFITLLTLPISVLREFLKLIAWKKGLAPSPGGDLAPAQKSRIELCLENHAGFTMDGKNES
SSVSKSNIHYDRAHNAVDFALTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGDNPNV
SFLGMEGSHGGRACWLRVDEWEKCKQRVTRTMDVNGSSAGDGNQGRLRVVADSVQRTLHG
CLQGLREGSGGAGTIGTT
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggcggaattagggcaacagaccgtggatttctcgacgctggtggccagggcggccgag
gaatcttatgtttctttgaaggaattggtggagaagtcgaaaggttcggacatttcggac
tcggagaagaagattgggatcctcaagtatgtagtcaagactcagcagcgtatgcttcga
ctcaatgtcctcgccaagtggtgccagcaggtccctcttatacaatattgtcaacaactt
gagtcgaccctatcaagtcatgacacatgtttcagccaagctgccgattcgatgtttttc
atgcatgagggcttacaacaagctcgtgctcctatctatgatgttccatctgctgttgag
gtcctactgaatggaacataccatcgtttgccaaaatgtattgaagatgttggtactcag
agcacgttgaatgtggatcagcaaaagccagccctaatgaagctggatgcactcgtcagg
tccaagctacttgaagtttcgcttccaaaagatattactgaagtaaagatttcagatggt
actgtgctgcttcgtgtagatggggagtttaaggttcttgtcacccttggttaccgaggg
cacttgtccttgtggaggatattacacttggagctgcttgttggtgagaggtctgggcct
gttaagctggaagaattgcagcggcatgctcttggtgatgatttggaacgcagaatggct
gctgtagaagacccatttatgacattgtattctattcttcatgaactttgtgttgcactt
gtaatggatactgttataagacaagttcaagcacttcgacaagggagatggaaagatgca
attaagtttgagctcatatctgatggtagcatgggacaaggtgggaatgctggtggcacg
cagataacaccagatggagaggctgatgcggctggtttgagaacacctggtttgaagatt
ttatattggttggattttgacaaaacctctagtactcctgacgtaggatcatgccctttc
attaaaattgaaccaggacctgatctgcaaatcaagtgccttcacagctcatttgtcatt
gatcctgtgactggaaaggaggcagaattttcccttgaccagagttgcattgatgttgag
aagttgctactcagagcaatttgttgcaacagatatactcgtctgcttgaaatttttaaa
gagctggagaaaaataatcagatcgttcgagccccaggagatgttcgtcttgagactcag
atggataaatttgacagtgacggtaaaaaggacatatctaaatttgattccaggaaggat
gaagggcaggaagttctgttggtccgtgcctacggcttatcgtttttcactcttggaata
aatttaaggaatggccgcttccttcttcactcatctaagaatactgtctcaccatctgaa
cttttggagtgtgaagaagctctaaaccaaagaactatgactgctgcacaagtttttatg
agcttgagaagcaaaagcatttcacacttgtttgcatgtgttggaaggtccttgggcctg
gaggtctttgaacgtggttttgcatcgttgaagttacctaagaatatttcaaatggttca
agtgtgttgctgatgagttttccagagtgtgggagttattatttgctgatgcaacttgag
aaggatttcaaaccgctgtttaacttaatagaaactcagccagatccttcagggaaagct
gaatcttttagcgacttgaataatatcattcgtgtaaaagatgttgatattggtcagatg
cagatgtgtgaagatgacctcaatctaagcctccttgactgtggaaaattactatctgtt
ttacctagtctcagtcctaaccggacttctgaacaaagtcttctttctgaattcaccttg
gagggatctgcacttgcctctagctttccctcaaagttttcatcaattgtggatgaaata
tttgagctggagaaagggtcatctgccgccaatctctctggtcagggcccaagtctgggt
tcaacatatggtacttctcctgcatctcattttggtgctggaggcatgaatctccattct
acaaaagttggaacgccatctcctaagtgggatggtggttcacaggtaccgaccagattg
tctggtatgccacctagttatagtggttccatctacactgggagccattataggggcttg
atacagtcaggttctactggttccatttccgttggccctggaagaagtcaggtgaagaac
ttatcctcctcaaagtctgatcaagatttgacctctctgaggtctccacagtctggtgga
cttgggtcttactcattgatcgatgaacatcagataacaactcccggaattcgtacagct
ggacatttgtctccctctcctcaacttggccttcctgcttctggagcaagtgcaaaacct
attggagctagaaattcatccggcaatgctatacctggaaatcttagagtttctggattt
aattcattggttgcgtcacccgtatctcaaacaccagattccaattgtatgaattcaaat
cttgatactgttccacgacaagagaaaatgtcaagaaagcgtacgctgacagatttgttg
agctctctcccatcacttcaacatctagaggctaatgacaaatcttacaagagaaggaga
atagtggaatggagacctcaacaacttacttcacagatgctcattacctcagaacttttt
cgaaaaactgagggatacagttatggagatcttatatctgaagcaaataagggtaattta
ccctctagtatatatgtttctgctctgcttcacgtggtcagacactgctcactttgtatt
aagcatgcccgactaaccagtcagatggacgcacttgaaattccatatgttgaagaagtg
ggtctaagaagtgcatcctcaaacttgtggtttcgtcttccatttgcaagaggtgataca
tggcagcatatatgcttacgattggggagacctggaagtatgtattgggatgtgaaaatt
tgtgatcaacacttcggggacttgtgggaacttcagaaaggaatgagtaattctccatgg
ggtcctggtgttcgtattgctaatacatctgatgttgatgctcatattcggtatgatgct
gaaggtgttgttttgagttaccattctgttgaggctgatagtattaggaaactagtagcc
gatatcgaaaggctttctaatgctagaacctttgcccttggaatgcgaagtctacttgga
gtacggacagatgagaaatttgaagaaaatgctactgcctctgatgttaaagcaccaggt
ggtgtgaaaactgtactagacatggctgacaaattttctgaacagatgaggagggcattt
aaaattgaagctgttggactcatgagtttatggttcagttttggatctggagtacttgct
cgctttgttgttgaatgggaatcaggcaaagagggctgcacaatgcatgtttctcctgac
caactttggccccacaccaagtttttggaagatttcatcaatggtgctgaagttgcatca
cttttggattgtatacgactgactgctggacccttacaggctcttgctgctgccacacgt
cctgcacgagctgctcctgtttcaggagtttctggtgttgcagcacctatctcctctatg
tcaagacagagtggatatgttccgtctcagggtcagctgccaagcattgcaacacccaat
gctagtcaggctgcatctgttcccgcaggaaatgcttctgcctctgtaacttcaggtcct
cttgcttctcaaaatcctcatactactgcaatgttggcagctgcagccgccgctgccgct
gggagaggtggtcctggcattgttcctagttcattgttgccaattgatgtctctgtagta
ctccgtggtccctactggatacggattatatatcggaaaaattttgctgttgacatgcga
tgttttgccggagatcaggtttggttgcaacctgcaacgccacccaaagggggaccgtct
gttggaggatcacttccatgtccacaattccggccctttataatggagcatgttgctcag
gaattgaatggcatagattccagttttgctggtggtcaacaaacagttgttctagccaat
ggtagtagttcaaatccaagtacagtttcacagctttcagcctccaatggaaacagaacc
aatctcgcaaattctgctggaatatctcggtcagcaaatgctgtttctggtctaaatcgc
atgggaaatgctgttcctgccggatcaaatttagctgcagcaaactctgggttgccatta
cgcagatctcctggcacaggtgtacctgctcatgtaagaggcgaactgaatacagccatt
attgggcttggggatgatggaggttatgggggtggatgggtccctcttgttgccctcaag
aaggttcttcgaggtattctcaaatatctgggagtgttgtggctatttgcacagttacca
gagcttttgaaagagatcctcggttcaatcctaaaggataatgaaggtgcacttttgaat
ttggatcaggagcaaccagcattacgcttctttatcgggggttatgtttttgctgttagt
gtacacagggttcaacttcttctccaagttattagtgtaactagatttcaccattcccag
cggcagcagcagaattcagcaactgctcaggatgaattgactccgtctgaaataagtgaa
atatgcgattactttagtcgtcgcgttgcatcggagccctatgatgcttctcgtgttgct
tcattcattacgctattaactctaccaatttcggttttaagagaatttttgaaactcatt
gcgtggaagaaaggcttagctccatctccaggtggagatttggctcctgctcaaaaatcc
cgcattgaactttgtcttgagaatcatgcaggctttactatggatggaaaaaatgaaagt
tcctctgtatctaaaagcaatattcactatgatcgagcacataatgctgttgattttgca
ctgactgttgttcttgatcctgctcacataccacatataaatgctgctggtggtgctgct
tggcttccttattgtgtttctgtgagattgagatactcatttggtgataatcctaatgta
tctttcctggggatggagggaagccatggaggtcgggcatgctggctgagagttgatgag
tgggaaaaatgtaagcagcgggtaacccgcactatggacgtgaatggatcttcagccgga
gatggtaatcagggaagattgagagttgttgccgatagtgtacaaagaacattgcatggt
tgccttcaaggtctgagagagggcagcggtggtgctggcaccattggaacaacatga
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integrated database retrieval system
