Coffea arabica (coffee): 113732929
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Entry
113732929 CDS
T11342
Name
(RefSeq) tlg2p-like protein a isoform X1
KO
K08489
syntaxin 16
Organism
carb Coffea arabica (coffee)
Pathway
carb04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113732929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113732929
Membrane trafficking [BR:
carb04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
113732929
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
MSC_0620_UU052
EF-G-binding_N
Use1
DUF16
EFL1
MCPsignal
Lips
ZSWIM1-3_C
Motif
Other DBs
NCBI-GeneID:
113732929
NCBI-ProteinID:
XP_027114782
UniProt:
A0A6P6WMB2
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Position
2e
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AA seq
328 aa
AA seq
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MATRNRTILFRKYRDALKSVRIPAGGGSLPSPSSSSSGGGPVIELSTTSLLHPNRAYTPL
STEDPGTSSRGAVTVGLPPAWVDVSEEIAANVQRVRAKMAELAKAHAKALMPSFGDGKED
QRRIESLTQEITDLLRKSEKKLQRLSQGGPSEDSNVRKNVQRSLATDLQSLSVELRKKQS
TYLKRLQQQKEGPDGVDLEMNLNGSHSKQFEDDFDDLGFNEHQMARLKKSEAFTAERERE
IQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVAASVEEGLKQLQKAERTQKQG
GMVMCATVLVIMCFIMLVLLILKTILHI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgagaaataggacgattttgtttagaaaatatagggatgcattaaagagcgtt
agaattccggccggtggtggctccttgccgtcgccctcgtcgagctcctccggcggtggc
cccgtgatcgagttgtctacgacgtcgttgctccaccccaatcgggcttatactcccctc
agcactgaagatcctggaacctctagtagaggtgcagtaacggttggtctgccaccagct
tgggtagatgtttcagaagagattgcagcaaatgtgcaacgtgttcgagcaaaaatggca
gagctagccaaggctcatgcaaaggctttaatgccctcatttggggatggcaaagaagat
caacgcaggattgagtctcttacccaagaaataactgatcttttaagaaagtcagaaaag
aagttacagagactctctcaaggtgggccttctgaggattcaaatgttcgaaaaaatgtg
cagagatctcttgctactgaccttcagagtctgtcagtggaactacgtaagaaacaatca
acatatttgaagcgattgcaacagcagaaagagggtcctgatggagttgacttggaaatg
aacttgaatggaagccattccaaacagtttgaagatgattttgatgacctgggatttaat
gaacatcaaatggccagattaaagaaaagtgaggctttcacagcagagagggagagagaa
attcaacaggttgtggaatcagttaatgaacttgcccaaataatgaaggatctgtcggtc
ctcgtgattgaccagggtacaattgttgataggatagactacaatatccaaaatgtcgct
gcatcagttgaggagggccttaaacagttgcagaaggccgagagaacacaaaaacaaggg
gggatggttatgtgcgccactgtacttgtcatcatgtgttttatcatgctagtcctcctg
attctgaagacgatattacatatttga
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