Coffea arabica (coffee): 113732939
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Entry
113732939 CDS
T11342
Name
(RefSeq) ATP-dependent DNA helicase Q-like 1 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carb03400
]
113732939
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113732939
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
113732939
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_RECQL1
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
APOBEC4_like
Motif
Other DBs
NCBI-GeneID:
113732939
NCBI-ProteinID:
XP_027114800
UniProt:
A0A6P6WHW9
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All DBs
Position
2e
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AA seq
618 aa
AA seq
DB search
MDEHDLELEKVKLISLAVEFGFDEYSAKKCLDRLIELYGEEGRDFIRVEYCGDDFLAALA
ESMRDTEDWENDDFQAMESEACGALAEMLDKDIKIRVERNEERKDNGGVISENSVQVILD
SSSGDSEKDDDDDDFVIPRKNGGNSITIQSQGLDRRSSKRTSMSEECISSVTPSSVSSSG
RFSDKTNNEPRTLTYEELLHLDDIELANVVVFGNRSFRPLQYKACKAFREQNDCFILMPT
GGGKSLCYQLPAILQPGVTIVISPLLSLIQDQIFTLNLKFAIPSTFLNSQQTPSQSAAVF
EELRRVRPSCKLLYVTPERIAGNLPFQDILKCLYRKGQLAGFVVDEAHCVSQWGHDFRPD
YRVLGCLKRNFPSVPLMALTATATEKVREDILNALAIPRALVLEMSFDRPNLKYEVLEKS
KEPLKQLGRLLLDRFKNLCGIVYCLSKSECAEVSKYLNEKCNVKTEYYHAGLAARQRIAV
QKKWHAGEVHVVCATIAFGMGIDKPDVRFVVHNTMSKSIESYYQESGRAGRDNFPAKCIA
LYQKKDFSRVVCMLRNGQGRKIESFKLAMDQARKMQHYCELKTECRRQYLLAHFGESFDP
NACKNGSSPCDNCLRASS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcacgatcttgagctcgaaaaagtgaaattaatcagcttagctgtcgaattc
ggattcgatgaatactccgctaagaaatgcttagatcgcctcattgaactctacggcgag
gagggcagagatttcatccgtgtggagtattgcggcgatgattttttggcggcattggcg
gaatccatgcgagacacggaggactgggaaaatgatgattttcaagcaatggagtctgag
gcttgtggagctttggccgaaatgctggacaaggatattaaaattcgggtcgaaagaaat
gaggaaagaaaggataatgggggtgttatctctgaaaattctgttcaggttattctagat
tcttcttcaggtgatagtgagaaagatgacgacgatgatgattttgtaattcctagaaaa
aatggtggtaacagcattacaattcagagtcagggccttgatagacgttcgagtaaaaga
acttcgatgtctgaggagtgcataagcagtgttacacctagttcagtttcatcctcaggg
agattttcagacaagacaaataacgaacccaggaccttgacatatgaggagttgctgcat
ctggatgacattgaattggctaacgtagttgtatttggaaaccgtagctttcggccttta
cagtataaggcttgtaaagcatttcgggaacagaatgactgctttatcctcatgccaaca
ggaggtggtaaaagcctttgttaccagcttccagccattttacaaccaggggttacaatt
gttatatccccactgctttccctcattcaggaccaaatattcaccctgaacctcaagttt
gccataccatctacttttctaaattctcaacagactccttcacaatctgcagcagtattt
gaagaattaaggagagttagaccatcatgtaagctactttatgtaactcctgaaagaatt
gcaggaaatttaccatttcaagacatcctaaaatgtctgtacaggaaggggcaattggct
ggatttgttgttgatgaagcacattgtgtaagccaatggggacacgactttcgtccagat
tatagagttttgggatgcctcaagaggaacttccccagtgttcctttaatggcattaaca
gccacagcaaccgaaaaagttcgtgaggacatcttaaatgcccttgcaattcctcgtgca
ctcgttctggagatgagctttgacagacccaacttaaagtatgaagtacttgagaagagc
aaagaaccactcaagcagcttggaagattactgttggaccgtttcaagaatttatgtggc
attgtgtactgtctttcaaaaagtgaatgtgcagaggtctcaaaatatcttaatgaaaaa
tgtaacgtcaaaacagagtattaccatgctggattggcagctcgtcagaggatagcagtt
caaaagaaatggcatgctggagaagtccatgttgtatgtgccacgatagcttttgggatg
ggaatagacaagccagatgttaggttcgttgttcacaatacaatgtcaaaatcaattgaa
agctattatcaagaatctggaagagcaggcagagataactttcctgctaaatgcattgct
ctataccagaagaaggatttcagtcgtgtggtctgtatgttaagaaatgggcaagggcgc
aaaattgagagcttcaaattggctatggatcaagctcggaaaatgcaacactattgtgaa
cttaagactgaatgtcgtagacaatacttattagctcattttggagagtcctttgaccca
aacgcctgtaaaaatggttctagtccctgtgacaactgcttgagggcttcctcatag
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