Coffea arabica (coffee): 113733082
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Entry
113733082 CDS
T11342
Name
(RefSeq) protein indeterminate-domain 12-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113733082
Transcription factors [BR:
carb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113733082
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
DUF7128
Motif
Other DBs
NCBI-GeneID:
113733082
NCBI-ProteinID:
XP_027115030
UniProt:
A0A6P6UZL6
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Position
1e:complement(53278286..53282509)
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AA seq
490 aa
AA seq
DB search
MFHYTVMSNSASLSEEASVSSVSKVQDFGSLNPMVQTSSSHQQPQKIKKKRNLPGNPDPD
AEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEIKKRAYVC
PEPTCVHHHPSRALGDLTGIKKHYCRKHGEKKWKCEKCSKIYAVQSDWKAHTKTCGTREY
RCDCGTLFSRKDSFITHRAFCDALAQESARLSANSVLASTAAATANPQLFRLNFHQTTTT
PSSLFPFPPTQHDQQQPHFPNPPTPTPTDHHISLNHPWVDSCQNPKPTQYPNQPQLLHDI
KPETLHLPISSQFLYQEPPPPTHKRINIPSLIPVQTQLNDTAGVHHLSATALLQKAATLG
AHSVGHVNSAMTQLDMSTIGHVTNGIPPEYSGFTTSANLAAWQKSDRLTRDFLGLTGDHQ
SCGGGGGSVNGNGNANIDVNVNVNMRGVLSFTGSVEFPATYERDLSLLKHQSFGFAEPAA
SEAWRNCSRV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtttcactacacagtaatgtctaactcagcttctctgtctgaggaagctagtgtctct
tctgtctctaaggttcaagattttggcagcttaaatcctatggttcagaccagttcatct
catcagcagcctcagaagatcaagaagaagagaaatctccctggaaatccggaccctgat
gctgaggtgattgcattatcaccaaagacacttctggctacaaatcgttttgtttgtgag
atctgcaacaagggatttcagagagatcagaaccttcagcttcataggaggggccacaac
cttccctggaaactgaaacaaagaaacaacaaagaaatcaagaaaagagcgtatgtttgc
ccagagcccacgtgcgttcatcaccacccctcaagggctcttggtgatcttacggggatc
aagaaacactactgcaggaaacatggggagaagaaatggaagtgtgagaagtgctcaaag
atatatgcagttcaatcagattggaaagctcacacaaaaacctgcggaactagagaatat
agatgtgattgtggtacccttttttccaggaaggatagcttcatcacccacagagcattc
tgcgatgctttggctcaggaaagtgcaagactctcagcaaactcagtactcgcctcaaca
gcagcagccaccgccaacccacagctcttccgtctaaatttccatcagaccaccaccacc
ccatcatccctcttcccattcccgccaacccaacatgatcaacagcagccccacttccca
aaccctcctactcctactccaactgatcatcacatttcccttaaccacccttgggtcgat
tcttgtcaaaaccctaaacctacccaatacccaaaccaaccacaacttcttcacgatatc
aagcctgaaaccctccaccttcccatttcttcgcagtttttatatcaagaaccaccgcca
ccaacccacaagaggatcaatatcccgtcattaatacctgtccaaacccagctcaatgac
actgccggcgttcatcatctctccgccaccgctctccttcaaaaggcggccaccctgggt
gcacattctgttggtcacgtcaactctgctatgactcagctcgacatgagcaccattggt
cacgtcaccaatggaatcccgcctgagtactcgggcttcaccacctccgcaaatcttgct
gcgtggcaaaaaagtgaccgtctcaccagggattttcttggcttgaccggtgatcaccag
tcatgtggcggcggcggcggttctgtcaacgggaatggaaatgcgaatattgacgttaat
gttaacgtgaatatgagaggtgtgctatcattcaccgggagcgtggagttcccggccact
tatgagcgtgacctttcactgctgaagcaccagagctttggttttgctgagcctgcagcc
tcggaagcttggagaaattgttcaagagtttga
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