Coffea arabica (coffee): 113733697
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Entry
113733697 CDS
T11342
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113733697
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113733697
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
VacA2
ZirS_C
Beta_helix_3
Motif
Other DBs
NCBI-GeneID:
113733697
NCBI-ProteinID:
XP_027115693
UniProt:
A0A6P6WJT1
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Position
3c:43994474..43997323
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AA seq
392 aa
AA seq
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MEKPISLFVVTFLFFLLNQSRAIVGKYNVLELGAKADGNTDSTQSLLSAWAAACGSSKPS
TILVPKGRFLVKRVQFSGPCKNKAINFRIRGTLVAPSGHEALGNAGYWLHFQNVDGVTIH
GGILDARGAGLWACKAAGNGCSSGGATTLGFTNSNNIAITRLTSLNSQMYHLVFIGCNQV
KLQKIKVLAAGNSPNTDGIHVQFSSGVSILSSRISTGDDCVSIGPGTTNLWIENVLCGPG
HGISIGSLAKDFEEEGVQNVTVKRVKFRNTQNGARIKSWGRPSKGFVKDVLFQHVTMINV
QNPIVIDQNYCPRHINCPGQVSGVKINDVTYRDIHGTSATEVAVKFDCSEKYPCSGIRLE
DVKLTYQNQKAKSSCANAAGTALGLLEPASCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcccataagtctttttgttgtcacatttctcttcttcttgttaaatcaatcg
agggccattgtgggcaagtacaacgttctggaattgggagcaaaggctgacgggaataca
gattcaacccagtctctgttgagtgcatgggcagcagcttgtggctcttccaaaccatcc
acaattcttgtaccaaaagggaggtttttagtcaagcgagtacaattctctggaccatgc
aagaataaagccataaactttcgaattcggggtacccttgtggctccttcaggtcatgaa
gctcttggaaatgccggttactggcttcactttcagaatgttgatggagtcaccattcat
ggtggcattctggatgctcgaggtgctggtctctgggcttgcaaagcagccgggaatggg
tgttctagcggcggcgcgacgacgctaggattcaccaactcaaacaacattgccattacc
aggctcacttctctcaacagccaaatgtatcacctggtattcatcggttgcaatcaagtc
aagctgcaaaagattaaagttttggcagcaggaaacagccccaacacggatggaatacac
gtccagttttcatctggggtgtctattttgagctctaggatcagcacaggagatgattgt
gtctcaattggccctggcaccactaatttgtggattgagaatgttttgtgcggccccggc
cacggcattagcattgggagtctagcaaaagattttgaagaagagggagtacagaatgtg
acagtaaaaagagttaaattcaggaatacacaaaatggtgcaagaattaaatcatggggt
aggccaagcaaaggattcgtgaaggatgtcctattccagcacgtcactatgatcaatgtc
caaaaccccattgttatcgaccaaaattattgcccaaggcacataaattgtcctggccag
gtttcgggagttaaaataaatgatgtaacatatcgcgacatccatggaacatcagcaaca
gaagttgcagttaaatttgattgtagcgagaagtatccatgcagcggaataagattggaa
gatgtgaagttgacataccaaaatcagaaagctaaatcatcttgtgccaatgctgctgga
actgcacttggtttgcttgagcctgcaagctgtttgtag
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