Coffea arabica (coffee): 113733717
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Entry
113733717 CDS
T11342
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113733717
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113733717
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
113733717
NCBI-ProteinID:
XP_027115710
UniProt:
A0A6P6WKH0
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Position
3c:43974692..43976569
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AA seq
392 aa
AA seq
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MNSKMRFLAVPFLFIFFLLPSTESVTYNVQSYGAKSDGRSDSTKSFLSAWAAACASVEPA
TIYVPRGRYLVGGASFSGQNCKNNAITIRIDGTLVAPSDYNVLGHTGNWLTFERTNGLSI
YGGTLDGQGTGLWACKNSGKNCPTGATSLGFYNSNNVLVSGLSSLNSQIFHIILDGCKNT
RLEGVKISAPENSPNTDGIHVQSSSGVAITNSHIGTGDDCISLGPGSSNIWIENINCGPG
HGISIGSLGSNLQEPGVKNVTVKTVTLSGTQNGLRIKTWAMPSNGFVTGVLFQHAVMVNV
QNPIIIDQNYCPNRAKCPGQASGVRISDVTYQDVHGTSATEVAVNFDCSKKYPCSRIILE
DVNLSYKDRPATASCVNAGGSSSGLVEPKACL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaaaatgagatttcttgctgtcccatttctcttcattttcttcctcttgcca
tcaactgagagtgtaacgtacaatgtgcagagttacggggcgaaatctgacggaagaagt
gattccacgaaatcttttctgagtgcatgggctgcagcttgtgcctcagttgagcctgca
acaatttatgttccacgaggaagatatttggttggaggagcatcattttcgggccaaaat
tgcaagaataatgctataaccattcgcattgatggaacccttgttgctccatctgattat
aatgtccttggacatactggtaactggctcacgtttgaaagaactaatggactttcgatt
tacggtggaactcttgatggccaagggactggtctctgggcttgcaaaaactccggcaag
aattgccctacaggagcaacgtcactgggattctacaattcaaacaatgtcttggtcagt
ggattaagttcgttaaacagtcaaattttccatatcatcctcgacggctgcaaaaacact
aggctagaaggagtaaagatttcagctccagaaaacagcccaaacactgatggaattcat
gtccaatcatcttctggtgttgcaattactaactctcacattggcactggtgatgattgc
atctcattaggccctggaagttccaacatatggattgagaatatcaactgtggtcctggc
catggaataagtattggcagtttgggaagtaatttgcaagaaccaggagttaaaaatgtg
acagttaaaactgttacactttcgggcacacaaaatggtctgaggataaaaacatgggca
atgcctagcaatggatttgttactggagttctgtttcagcatgcagtaatggttaatgtc
caaaaccccatcattatcgaccaaaattactgcccaaatagggccaaatgtcctggtcag
gcctcaggtgtgaggattagtgatgtgacataccaagatgtacatggaacatcagcaact
gaagttgctgtaaattttgactgcagtaaaaagtatccatgcagccgtataattctggag
gatgtcaatctttcctacaaagatcgaccagctacggcttcatgtgtcaatgcgggcgga
tcttcatccggtctagttgagccgaaagcctgtttgtag
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