Coffea arabica (coffee): 113733750
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Entry
113733750 CDS
T11342
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113733750
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113733750
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
113733750
NCBI-ProteinID:
XP_027115737
UniProt:
A0A6P6WQ66
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Position
3c
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AA seq
391 aa
AA seq
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MEKPISHFTVTLLFLLFNQSLAIPGTHNILDLGAKPDGKTDSSKSLLSAWAAACGSPKPA
TIFVPKGRYFVKQAQFLGPCKNRAISFRINGTLVAPSDYKAIGNADFWLQFLRVDGVSIR
GGILDGQGTGLWGCKASGKNCPSGAATLGFTNSNNIAIAGLTSLNSQLFHLVFNGCNTVK
LQGIKVSAAGNSPNTDGIHVQYSSGVTILNSKISTGDDCVSIGPGTTSLWIENVLCGPGH
GISIGSLGKDFEEEGVQNVTVKGVTFKNTQNGVRIKSWGRPSKGFVKDVLFQHATMINVQ
NPILIDQNYCPDNINCPGQVSGIKINDVTYQDIHGTSATEIAVKIDCSKKNPCSGIRLED
VKLTYKNQPAKSSCANAAGTTLGLLGPDSCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcccattagtcatttcactgttacacttctcttcctgttgttcaatcaatca
ttggccattcctggcacgcacaacattttagacttgggagcaaaacctgatgggaaaact
gattcatccaagtccttattaagtgcatgggctgcagcttgtggctctcccaaaccggcc
acaatttttgtaccaaaaggaaggtattttgtgaagcaagcacaatttctaggaccatgc
aagaatagagccataagctttagaataaatggtaccctcgtggctccttcagattacaaa
gccattggaaatgctgatttttggcttcaatttctaagggttgatggagtttccattcgc
ggtggcattcttgatggccaaggtactggtctatggggttgcaaagcctccggcaagaat
tgccctagcggcgcagcgacattgggatttaccaactcaaacaacattgcaattgccggc
ctaacttctctcaatagccaattattccacttggtgttcaacggctgcaacaccgtgaaa
ttgcaaggaataaaggtttcggcggccggaaacagccccaacacggacgggattcatgtg
caatattcatcaggagtcacaatcttgaattccaagataagtactggagatgactgcgtt
tcaattggtcctggcactactagtttgtggattgaaaatgttctttgtggccctggccat
ggcatcagcattgggagtcttggaaaagattttgaagaagagggagtacagaatgtgact
gtaaaaggtgttacattcaagaatacacagaatggtgtaaggattaaatcatggggtagg
ccaagcaaaggttttgtcaaggatgttttgttccagcatgccactatgatcaatgtccaa
aaccccatccttattgatcagaactattgcccagataacatcaactgtcctggccaggtg
tctggcataaaaataaatgatgttacgtatcaagacatccacggaacatcagcaacagaa
attgcagtcaaaattgattgtagcaagaagaatccatgcagcggaataagattggaagat
gtgaagttgacatacaaaaatcaaccagccaaatcatcttgtgccaatgctgctggaact
acacttggcctgcttggccctgatagctgtttgtag
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