Coffea arabica (coffee): 113733772
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Entry
113733772 CDS
T11342
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113733772
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113733772
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
CfAFP
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
113733772
NCBI-ProteinID:
XP_071939352
UniProt:
A0ABM4X5P4
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Position
3c:complement(43863840..43865564)
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AA seq
392 aa
AA seq
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MAYPRKLFSLALPFLFFFISSASTITYNVRKFGAKPDGKTDSTKAFLSAWAAACASVMSA
TIYVPRGRYLLGAASFWGNKCKNNAIKIRIDGTLVAPSNYRTIGYAGNWLKFERVNGVTI
SGGTLDGQGSSLWNCKASKSNCPGGPTTLAFYNSNNIVISKLTSLNSQMFHVMLYGCQNA
KLQGMKISASATSPNTDGIHISGSSGVTILGSNIATGDDCISIGPGASNLWIENVSCGPG
HGISIGSLGWDMQEPGVQNVTVKTVTFRGTQNGLRIKTWARPSNGFVKRVLFQNAVMLNV
RYPIIIDQSYCPTKNNCPNQGSGVKISDVTYHQIHGTSSSQVAIAIDCSKDSPCSGIRLQ
DVNLRYMNQPAQVSCSNVAGTSTGFVQPKGCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcttatccaagaaaactgttttcactcgcattgcccttcttgttcttcttcatatca
tcagcctccacgatcacatataatgtgcgaaagtttggagccaaacctgatggaaagacc
gattcgacaaaggcctttctcagtgcatgggcagcagcttgtgcttcagtaatgtctgca
acaatttatgtaccgcggggaagatacttgctcggggctgcatcattctggggaaataaa
tgcaagaataatgcaattaaaatacgcatagatggtactcttgtagctccctcgaattat
cgtactattggctatgctggcaactggctcaagtttgaaagagtcaatggagtgacaatt
tctggcggaactttagatggacaaggcagtagtctttggaactgcaaagcctccaagagt
aactgtcctggtggtccaacgacattggcattctacaattcaaataacattgtcatcagc
aaattaacgtcattgaacagccaaatgttccatgttatgctttacggctgtcaaaatgct
aagctacaagggatgaagatctcagcctcagccactagtccaaatactgatggcattcat
atttcagggtcctcaggtgttaccatattgggctctaacatagctacaggggacgattgc
atttcaattggccccggcgcctccaatttgtggatcgagaatgtttcttgtggccctggc
catggaataagcattgggagtctaggatgggatatgcaagaacctggagtacaaaatgtg
actgttaaaaccgttactttcagaggcacacaaaatggcttgaggataaagacttgggca
aggcctagcaatggatttgttaagagggtccttttccaaaatgcagtaatgctgaatgtg
agataccctattatcatcgaccaaagttattgtccaaccaaaaataattgtccaaatcag
ggttctggtgtaaagattagtgatgtgacttatcaccaaattcatggaacatcatcatca
caagtagctatagcgattgattgcagcaaggactccccatgcagtggcataagattgcaa
gatgtcaacctcagatacatgaatcaaccagctcaggtatcatgctccaatgttgctgga
acatctacaggctttgttcaaccgaaaggctgcttatga
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