Coffea arabica (coffee): 113733798
Help
Entry
113733798 CDS
T11342
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113733798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113733798
03032 DNA replication proteins [BR:
carb03032
]
113733798
Spliceosome [BR:
carb03041
]
Complex A
U1 snRNP components
Sm proteins
113733798
U2 snRNP components
113733798
Complex B
U1 snRNP components
113733798
U4/U6.U5 tri-snRNP components
113733798
Complex C
U2 snRNP components
113733798
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113733798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin7
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
113733798
NCBI-ProteinID:
XP_027115775
UniProt:
A0A6P6V2G4
LinkDB
All DBs
Position
1e:complement(53754022..53757237)
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTTGRPLGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgttagatttctgatgaagttgaacaatgagactgtgtcgattgagctaaaa
aacggcaccgttgttcacggaaccattacaggtgtggatatcagcatgaacacacatttg
aagactgtaaaacttacactaaagggaaagaacccagttactttggatcacctgagtgtg
agaggcaataacattcgttattacatccttccagacagcttaaaccttgagacattgctg
gtggaagagacacctagggtgaagcctaagaagccaaccactgggaggcctttgggacga
ggacgagggcgtggtcgcgggcgtggccgcggtcgaggtcgctag
DBGET
integrated database retrieval system
