Coffea arabica (coffee): 113734042
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Entry
113734042 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113734042
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113734042
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box-like
F-box_5
F-box
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
113734042
NCBI-ProteinID:
XP_027116157
UniProt:
A0A6P6WRI1
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Position
3c:complement(2313305..2321973)
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AA seq
607 aa
AA seq
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MKGHDRINSSLPDELILEIFRYLDTKPSRDAASLVCKRWLGLERLSRDTIRIGASGSPDG
LVKMLSSRFPHVRNVFIDERRSITLPFQFGKRRRADHSALSPLKLQFAAGKTGPEDYETE
TYYLSDAGLAVVGDGFSKLEKLSLIWCSNVTSLGLRSIAEKCNALKSLDLQGCYVGDQGL
AAVGEWCKQLEDLNLRFCEGLTDTGLVNLALGCRRKLKSLGVAACAKITDVSLEAVGSYC
LSLETLSLDSEFIHNKGVLAVAKGCRVLKVLKLQCINVTDEALEAVGIVCNTLEFLALYS
FQRFTDKSLCAIGKGCKRLKNLTLSDCYFLSDKGLEAVAIGCTELTHLEVNGCHNIGTFG
LESIGRSCASLSELALLYCQKIGNFALSEIGRGCKFLQALHLVDCSSIGDDAIISIAKGC
RNLKKLHIRRCYEVGSEGIVAVGENCKFLTDLSLRFCDKIGDEALVAIGNCHSLRYLNVS
GCHHIGDAGIIAIARGCPELSYLDVSVLQNLGDMAMAEMGEGCPMLKDIVLSHCRQITDV
GLSYLVSKCTFLETCHMVYCPGITTVGVATVVASCANIKKVLVERWKVSQRTRRRAGSTI
SYLCVDL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaagggccatgatcggataaattccagtttaccagatgagctaatcctcgagatcttc
cgttacttagatacgaagccgagccgcgacgcagcctcgctcgtctgcaagagatggctt
ggcctcgagcggctcagccgcgatacaattcgcatcggcgcgtccggtagccccgacggc
ctcgtcaagatgctatccagccggtttccccatgttcgaaacgtgtttattgatgaacgc
cgctccattactctaccttttcaatttggaaaaagacgacgtgcagatcattctgcactt
tcacctctcaaacttcaatttgctgctggaaaaactggccccgaagactatgaaacagaa
acatactatttatcggatgctgggctggctgttgttggagatggctttagcaaacttgaa
aaattgagtttgatatggtgctctaatgtgacaagtttagggttgagatctatcgcagag
aagtgtaatgcattgaagtctttggatttacagggttgctatgttggagatcaaggtcta
gcagccgttggagagtggtgtaagcaacttgaagatttgaacttgcggttttgtgaaggt
ctaactgacactggtttggtcaacttagcccttggttgtcgaaggaaattgaagtctctt
ggtgttgcagcttgtgcaaaaataacagatgtttcattggaagctgtaggatcttattgc
ctatctcttgaaaccttgtcattggattcagagtttatacataacaaaggtgtgcttgct
gtggccaaaggatgtcgggttctgaaagttttgaagctacaatgcattaatgtaacagat
gaggctctcgaagctgtgggcatcgtttgcaataccttggagttcttggcattatacagc
tttcagagattcactgacaagagtctgtgtgccataggaaaagggtgcaagagactaaag
aaccttaccttgagtgattgctatttcctaagtgataagggtttagaagctgttgccatc
ggttgtacagagctgacacatcttgaggtcaatggctgccacaatattggaacttttgga
ttggagtcgattggaagatcttgcgcgagcctttcagagttggccttgttgtactgtcaa
aagataggtaatttcgcactgtctgaaataggcagaggctgcaagttcttgcaagctctt
cacttggttgactgctcaagtattggtgatgatgccattattagtatagcaaaaggctgc
aggaatttgaaaaagcttcacattcgtcggtgttatgaggtaggcagtgagggaatagta
gctgttggggagaactgtaaatttcttacagatttgagtcttcgattctgcgataagata
ggagatgaggcacttgtcgcaattggtaactgtcactctttacgctacctgaatgttagc
ggctgccaccacattggagatgctggaattatagccattgctagagggtgtcctgagcta
agttacctggatgtaagcgtcctccagaatttgggggatatggccatggctgagatgggt
gaaggctgtcccatgctcaaggacattgttctatcacattgccgtcaaataacagatgta
ggtctcagctaccttgttagtaagtgcacctttttggagacatgccatatggtttattgc
cctggcattacaactgttggagtcgccactgtagttgcaagctgcgcaaacataaaaaag
gtgctggttgagaggtggaaggtcagccagaggactagacggagggctgggtctaccatc
tcgtatctttgcgttgacctttag
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