Coffea arabica (coffee): 113734109
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Entry
113734109 CDS
T11342
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like isoform X4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00061
Fatty acid biosynthesis
carb00071
Fatty acid degradation
carb01100
Metabolic pathways
carb01212
Fatty acid metabolism
carb04146
Peroxisome
Module
carb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
113734109
00071 Fatty acid degradation
113734109
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113734109
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
carb01004
]
113734109
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
113734109
Enzymes [BR:
carb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
113734109
Lipid biosynthesis proteins [BR:
carb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
113734109
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of breast milk
113734109
Exosomal proteins of breast cancer cells
113734109
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
113734109
NCBI-ProteinID:
XP_027116256
UniProt:
A0A6P6WNP0
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Position
3c:2810882..2818886
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AA seq
696 aa
AA seq
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MEAAAERRIKALQSHLNPSNCDEPSVLHPNPTSGEFVSDQGYSVVLPENLQTGKWNVYRS
ARSPLKLISRFADKPEIATLHDNLVQSAKSFSDHKYLGTRVRDDGTVGEYRWITYGEAST
ARSAIGSGLVSCGLQKGSCVGLYFINRPEWLIVDHACSAYSFISVPLYDTLGPAAVKYIV
NHASIQTIFCMLQTLDTLLRFLSEIPSVRLIVVVGGVDNRIPTLPSTTAVEVVSYSKLLS
QGLSNLHPFCPPNPDDIATIMYTSGTTGTPKGVVLTHANLIANVAGATYGAVLYPSDVYI
SYLPLAHIYERANQILAVYYGGASGFYQGDLLKLLEDMAVLKPTIFCSVPRLYNKIYAGI
MNAVKSSGVLRQRLFYAAYNAKKQAKFSGKKSSPMWDRLVFNRIKAMLGGRVRSMVSGAS
PLSPDVMDFLRVCFGCQVVEGYGMTETSCVITIMDEQDILSGHVGAPNAACEIKLVDVPE
MNYTTEDQPYPRGEICVRGPIVFQGYYKDEAQTRETIDEDGWLHTGDIGLWVPGGRLRII
DRKKNIFKLAQGEYIAPEKIENVYATSKFVAQIFVYGDSLNSSLVAIVSVEQEMLKAWAA
AQGIKCDHLQQLCTDQRARSAVLADMDAVGRAAQLRGFEFAKAVTLVLEPFTLENGLLTP
TFKIKRPQAKAYFAKAIADMYAELSASDSSSQKMKL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagcagctgaacgtcgcattaaagctctgcaaagccatctgaatccgtccaac
tgcgatgaaccttcggtactccatccaaatcccacctccggcgagtttgtttctgaccag
gggtatagtgttgtgcttccagagaatctgcagacagggaagtggaacgtgtacagatca
gctcgttctccacttaagctcatcagcagatttgctgataaaccagaaattgctactttg
catgataatttagtgcagtcagccaagtctttttcagatcacaagtatcttgggacacga
gttcgggacgatggaacggttggagagtataggtggattacatacggggaggcaagtact
gcaaggtcagcaattggttcaggcctagtgtcatgtggattacaaaagggttcctgtgta
gggctgtattttatcaacaggccagagtggctaattgttgatcatgcctgctctgcttat
tctttcatttcggttcctttatatgataccctaggtccagctgcagtcaaatatatcgta
aatcatgcatctatacaaactatattttgtatgctacaaacacttgacactttactgagg
ttcttatcagagattccttcagttcgactaattgtggtggttggtggtgttgataatcga
ataccaacattaccatcaacaactgcagtagaggtcgtgtcatattcaaagttacttagc
cagggcctttccaatcttcatcctttttgtccgcctaaccctgatgacatcgctacaatc
atgtatacaagtggtacgacaggtacaccaaagggtgttgtattgacccatgcaaactta
attgcgaatgttgctggtgcaacctatggtgctgtcttatatccttcagatgtttacata
tcatatcttcctctggcacacatatatgaacgggctaaccaaattctagcagtatattat
gggggagcgtcgggcttctatcaaggagaccttttaaagttgctggaggatatggctgtc
cttaaacctactatattttgcagtgttcctcggctatacaataaaatatatgctggcatc
atgaatgcggtaaagtcatctggtgtcttgaggcagaggctattttatgctgcatacaat
gctaaaaagcaagcaaaattcagcgggaaaaagtcatccccaatgtgggacaggttagtg
ttcaacagaataaaggcaatgttgggaggtagagttcgttccatggtttcaggggcctca
cccttgtctccagatgtcatggactttttgcgggtgtgtttcggttgtcaggtagtagaa
ggatacggaatgactgagacttcttgtgttataaccattatggatgagcaggatatccta
tctggtcatgttggcgcccctaatgctgcatgtgaaataaagcttgtagacgttccagaa
atgaactatacaactgaggatcagccgtatccacgtggtgaaatctgtgtaaggggaccg
attgtgttccaaggctattataaagatgaagcgcagacaagagaaaccatcgacgaagat
ggttggcttcacacaggagatattggattatgggtacctgggggtcggttgaggataatt
gataggaagaagaacatattcaagttggcacaaggagaatacatagctcctgagaaaatt
gagaatgtatatgcaacaagcaagtttgttgcgcagattttcgtgtatggtgacagcctg
aactcgtctctggttgcaatagtctcggtagagcaggaaatgttgaaagcatgggcggca
gctcaaggcatcaagtgtgaccacctacaacagctttgtactgatcaaagagcgaggtct
gcagtcctggctgatatggatgctgtgggaagggcagctcagctgagaggctttgagttt
gcaaaagctgtgactttggtacttgaaccattcactctagagaatggtctgctcacgccc
acattcaagatcaagagaccacaggcaaaagcatactttgcgaaagcaatagctgacatg
tatgctgaactttcagcttctgattcctcttcccagaaaatgaaattgtga
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