Coffea arabica (coffee): 113734219
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Entry
113734219 CDS
T11342
Name
(RefSeq) protein transport protein SEC23 G
KO
K14006
protein transport protein SEC23
Organism
carb Coffea arabica (coffee)
Pathway
carb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113734219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113734219
Membrane trafficking [BR:
carb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
113734219
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Zn_ribbon_CLPX_N
Zn_ribbon_10
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-GeneID:
113734219
NCBI-ProteinID:
XP_027116423
UniProt:
A0A6P6WLX6
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Position
3c
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AA seq
796 aa
AA seq
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MDFIELEAIEGLRWSWNSWPTTKSEAAALVVPLSILCTPLTQFGDLPVLPYDPLICSKCG
AVLNPYARVDYQSRIWYCSFCNGRNPFPKSYLGINENSIPAELFPTYSTVEYHLGKKSMN
LGHNPQKPGFGSGPGYGNGLVLSGSSSISRMGSFSSSNSSLAGSDRAGSGFVPGPAFVFV
VDVCTAEEELRVLKSELLHVITRLPENALAGLVVFDSLVRVYDLGFSECFRVVLFHGERE
ISSEQTKQLLGIHHIKQQLGKTSTVHKQGFLLPVSECEFSFTNAIEDLHSSPQALTGHRP
LRSTGVAISVAVGLLEGCFVSSASRIMVFTSGPATIGPGIIVASDYSHAIRTHRDIDSGY
APHYIRSCEFYKRLSKRLCDSSVVLDLFACSLDQVGAAELKVPVESSGGFMMLGESFDSE
KFRKCLNHIFIHDEEGNLNMCFDATIELVTTKDVKICGALGPCVSLQKKNSSVSDKGIGE
SGTYVWKLGTLNKKTCIAFFFEVGHEQHIQPNSAFFIQFITQYRYGNMGIRKRVTTAARR
WVANHSPGIHAGFDQEAAASVMARLAIHRTERFFARDVISWLDEKLILFASKFGQYVQED
PSSFHLASNFSLYPQFMYHLRRSQFIDVFNSTPDETAFFRLMLNCEGVVGSLLMVQPTLF
QYSFEGPPIPVLLDVYSIFPDVILLFDSYFNVVIHYGSKIAQWRKLGYDRDPNHENFRKL
LEAVDLDAKHLVAERIPVPKLIKCDQHSSQARFLLAKLNPSVTQNSTCTDGSEVIFTDDV
SLQVFIDHLQALAVQG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatcgaattggaagcaattgaaggcctcagatggtcatggaactcgtggccc
acaaccaaatccgaggctgcagctctggtagtccctttatcaattttgtgtactccttta
actcaattcggtgacctccctgtacttccctatgaccctttgatttgctccaagtgcggc
gccgttttgaacccgtatgcccgggtcgattatcagagtagaatctggtattgctcgttt
tgtaatggaagaaaccctttcccaaaatcttatcttggaattaatgaaaacagtatccca
gcggagctttttcccacttatagtactgtggaatatcatttggggaaaaaatcgatgaat
ttggggcataacccgcaaaaaccgggctttggttcggggcccggttatggcaatgggttg
gttttgtcgggttcgagttcgatttcgagaatgggatcgttttctagctcaaattcttca
ttggcggggtcggaccgggccgggtcgggctttgtcccaggacctgcttttgtgttcgtt
gtggatgtgtgtactgctgaggaggagcttagggtgttgaagagtgagttgttgcatgtg
atcacacggttgccagagaatgctcttgcggggttggtggtttttgattctttggtcagg
gtttatgatcttgggttttcagagtgtttcagggtggtgctgtttcatggtgagcgcgag
atatcgtccgagcagaccaaacagctgttggggattcatcacataaagcagcaacttgga
aagacatcaacagttcataaacagggattcctattgccagtatctgagtgtgagttcagt
ttcacgaatgccattgaagatcttcattcttcaccgcaggctctcactggtcatcgtcca
ttacggtccacaggggtagcaatatcagttgcagttggactattagaaggatgcttcgtt
agttcagcttcacgaatcatggttttcacttctggcccggcaactattggcccaggcatc
attgtagcttcagattacagtcatgccatcaggacccaccgagatatcgatagtggttat
gctcctcattacataaggtcctgtgaattctacaagcgattatcgaagaggttatgtgat
tcttcagttgtgctcgatctttttgcttgttcattagatcaagttggagcagcggagcta
aaggtccctgttgagagctctggtggattcatgatgttaggggagtcatttgactctgaa
aaattcagaaagtgcttgaatcacatattcatccatgatgaggaagggaatttgaacatg
tgctttgatgctactatagagttagtaaccacgaaggacgtcaaaatctgtggagctttg
ggtccctgtgtttctttgcagaaaaagaacagttctgtgagtgacaaaggaattggggag
agtggtacatatgtttggaagctaggtacactcaataaaaaaacatgcattgctttcttc
tttgaagtgggccatgaacaacacatccaacctaactctgcatttttcatacaattcata
actcagtacagatatgggaatatggggattcgcaagagagtgaccactgctgctcgaagg
tgggttgcgaatcactcaccaggaattcatgctgggtttgatcaggaagcagctgcttca
gtgatggctagacttgcaatccacagaacggaaagatttttcgctcgagatgttatcagt
tggctggatgagaagcttattctttttgcttcaaagttcgggcagtatgtgcaggaggat
ccatcttccttccatctggcgtccaacttctccctttatccgcaatttatgtatcattta
aggaggtctcagttcattgatgtgtttaatagcactccagatgagactgcgtttttcagg
cttatgctaaattgtgagggtgtggttggctctctactaatggtccagcctacccttttt
cagtattcatttgaaggaccaccaatcccagttcttctagatgtttactctatcttccct
gatgtgatactgctctttgattcctattttaatgtcgtgattcactatggatctaagatt
gcgcaatggaggaagcttggttatgatagggaccccaaccatgagaactttcgaaagctg
ctggaagctgttgaccttgacgcaaagcacctagtggctgaacggattccagtgccaaag
ctcataaagtgtgaccaacacagcagtcaggcaagatttcttcttgccaagttgaatcca
tcagtgacacagaactcaacatgtacagatggttcggaggttatttttactgatgacgtg
agcctgcaagtgttcattgatcacttgcaagctttggctgtgcagggctaa
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