Coffea arabica (coffee): 113734234
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Entry
113734234 CDS
T11342
Name
(RefSeq) syntaxin-related protein KNOLLE
KO
K08486
syntaxin 1B/2/3
Organism
carb Coffea arabica (coffee)
Pathway
carb04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113734234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113734234
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
113734234
Membrane trafficking [BR:
carb04131
]
SNARE
Syntaxin (Qa)
Stx-PM
113734234
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
113734234
Exosomal proteins of other body fluids (saliva and urine)
113734234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
LarA_C
GP41
T2SSF
DUF5089
DUF1942
DUF6584
ZapD
Motif
Other DBs
NCBI-GeneID:
113734234
NCBI-ProteinID:
XP_027116446
UniProt:
A0A6P6WP64
LinkDB
All DBs
Position
3c
Genome browser
AA seq
311 aa
AA seq
DB search
MNDLMTKSFTSYVDLKKEAMKDLEAGPDLEMGMTHMDQNLSSFLEEAELVKKEMNSIREI
LVRLQEANEEGKALHKPEALKSLRTRINADILAVLKRAKSIRSQLEEMDRANAVSRRLSG
CKQGTPVDRTRSAVTNGLRKKLKELMMEFQGLRQKMMTEYKETVGRRYFTVTGEYPDEEV
IEKIISSGNGQGGEEFMSRAIQEHGRGMVLETVVEIQDRYDAAKEIEKSLLELHQIFLDM
AVMVEAQGEQLDDIQHHVMNAAQYVSDGTKNLKTAKDYQRSSRKCMCIGIILLLVIILLV
IIPIATSFSKS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatttgatgacgaaatccttcacaagctatgtcgatctaaagaaagaagcaatg
aaagatctcgaagccggtccagatctagaaatggggatgacccatatggaccaaaacctc
agctcattcctggaagaagcagagctggtcaagaaagaaatgaattcaatcagagaaatc
ttggttcgtttgcaagaagccaatgaagaggggaaggctctgcacaagcccgaggcctta
aaatctcttcgaacacgcataaatgccgatattctggcagtgctgaagagggctaagagt
attaggtctcagctggaggaaatggacagggctaatgcagtgagtcggcgactttccggg
tgcaaacaggggaccccagttgatcggaccaggtctgcggtgactaatgggcttaggaag
aagctgaaggagctaatgatggagtttcaggggttgaggcagaagatgatgactgaatat
aaggaaactgtaggtagaaggtactttactgtgacgggcgagtaccccgatgaggaggtg
attgagaagattatttctagtggaaatggacagggtggtgaggaattcatgtccagggcc
attcaggaacatgggaggggaatggtgctggaaacagtggtggaaatacaggacaggtat
gatgcagcaaaggaaatagagaagagtttgctagagctgcatcaaatattcttggacatg
gctgtgatggtggaggcacaaggggagcaactggatgacattcagcaccatgtgatgaat
gctgctcagtatgtgagtgatggaaccaaaaatctcaagactgcaaaagactaccagagg
agcagcagaaagtgcatgtgcattgggatcatccttctccttgtgatcattcttcttgtc
ataatcccaattgctaccagttttagcaaatcatga
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