KEGG   Coffea arabica (coffee): 113734249
Entry
113734249         CDS       T11342                                 
Name
(RefSeq) DNA repair protein RAD5B isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:carb03400]
    113734249
DNA repair and recombination proteins [BR:carb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    113734249
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C UBA_RAD5A HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 DEAD zf-C3HC4_2 zf-C3HC4_4 Prok-RING_4 ResIII zf-RING_5 RING_XB3-XBAT31 zf-ANAPC11 zf-RING_4 GIP1_N Baculo_IE-1
Other DBs
NCBI-GeneID: 113734249
NCBI-ProteinID: XP_027116479
UniProt: A0A6P6WLY5
LinkDB
Position
3c:complement(4313912..4320415)
AA seq 1130 aa
MEARPIEAEEGREVKLIKSVFGLEKSEEEISNALTQCHNDVTRAINYLIDTPGILSPPVT
VKRTVTSTGARILTQIKQENSEEIKVMVKKEVENFDQSDVGFEKKEVLDEKKVISDGKMS
NGLVGRSRLSFEEWLQEQEKNKPSQLCRVKEEPNVVVDDKAVVRLDVPKMENENKGMVKK
EVEEIMCVQPLSARRMSDDEFRRVQMSTNGNDTGQSLVAKKEKVEDRMLCTTLIEDGDFP
EEPDWLLVGRHIIMGLSTTKGRKLENNEIVHIAFPDRNTSWIKSAIVRFSTIRNGEIGRL
PMEWSKCLTPLVNSSKVKVLGRSIAAPTNLHLMQEIMLYLSFYIHHSVFTEGDKSSWKLD
SPSDIDTTTYPLLTLFKLLKMKPFQEAEFTPEELDSRKRSLKLGQDDCDESVGMLPALKR
RKGCPQLPDQNKDEQAFSESSLNKLVGAADTYDLKEMEPPETLMCDLRPYQKQALFWMTE
SEKGVDVEEAAKTLHPCWGAYRIYDERASAIYVNIFSGEATTQLPTATQMARGGILADAM
GLGKTVMTIALILARRGRGTPEDQESIAKSEGDTEYIKKKKKESDHKVIRKVKGGTLIIC
PMALLGQWKDELETHSKPDSISISVFYGGDRSSDPRVIAEPDVILTTYGVLTAAYKNDGE
NSIFHRVDWYRVVLDEAHTIKSSKTLGAQAAFKLSSYCRWCLTGTPLQNKLEDLYSLLCF
LHVEPWCNWAWWQKLIQKPYESGDYRGMKLIKAILRPLMLRRTKDSKDKEGRPILVLPPT
DIKIIECEQSEAEHDFYDALFRRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFL
VMSRSDTQEFADLNKLARRFLDTNPDSATQKIPSRAYVEEVVEGIRKGENAECPICLESA
DDPVLTPCAHRMCRECLLSSWRSPTAGACPICRQVFKKTEIITCPSENRFRVDVEKNWKE
SSKVSKLLDCLERLRKSGSGEKSIVFSQWTSFLDLLEIPLKRRRIGFLRFDGRLSQKQRE
IVLREFNETGEKMVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKR
TVRVRRFIVKGTVEERLQQVQARKQRMIAGALTDEEVRSARIEELKMLFR
NT seq 3393 nt   +upstreamnt  +downstreamnt
atggaagcaagaccaattgaagcagaggaagggagggaagtcaagttgatcaaatcagtt
tttgggcttgaaaaatcggaagaggagatttccaatgctcttactcaatgccacaacgat
gtcacccgagccatcaattacctcattgacacccctgggattttatcgccaccagttaca
gttaagaggaccgttacaagcactggtgctaggattttaacccagattaagcaggaaaac
agcgaagaaatcaaagtgatggtgaaaaaggaggtggagaattttgatcaatctgatgtg
ggttttgagaaaaaagaggttttggatgaaaagaaagtgatttccgatggtaaaatgtcg
aatggattggtagggagatcaagattgagctttgaagagtggcttcaagaacaagaaaag
aataaaccttctcaactctgcagagtgaaagaggagccaaatgtggtggttgatgataag
gctgtcgtgagattggatgtgcctaagatggaaaatgagaataaagggatggtgaaaaag
gaggtggaagagataatgtgtgttcaaccgttgtctgctaggcgaatgtctgatgatgag
ttccggagggttcaaatgagtactaatggtaatgatactgggcagtcattggtggcgaag
aaggagaaggttgaggatagaatgctgtgcacaactctaattgaagatggggattttcca
gaagagcctgactggttgttggttgggaggcatattatcatggggctttcgactactaag
ggaaggaaacttgagaataatgagattgtgcacattgcatttcctgacagaaatacttca
tggatcaagtcagccattgttcgtttttccaccataagaaatggagagattggccgtctt
ccaatggaatggtcaaaatgcctcactccactcgtaaattcttcaaaagttaaagttctt
ggacgatctatagctgcccctacaaatcttcacttgatgcaagagattatgctgtatttg
agtttctacattcatcattcagtctttacagaaggcgataagtcttcttggaagcttgat
tctccatcagatattgacaccacgacatatcctctgctgactctgtttaagttgctgaaa
atgaagccatttcaggaggctgaatttaccccagaagaacttgactcccgaaaacgctcg
ctgaagttaggacaggatgattgtgacgaaagtgtgggaatgttgcctgcattaaaacga
agaaagggttgcccgcaacttccggatcaaaacaaggatgagcaagctttttcagaatca
tctttgaataagcttgttggtgcagcagatacgtatgacttgaaggaaatggagccccca
gaaacccttatgtgtgatctcagaccgtaccaaaagcaagcccttttttggatgacagaa
tctgagaagggagtagatgttgaagaagcagcaaaaactcttcatccttgttggggagca
tatcgtatatatgatgagagggcttccgcaatatatgttaacattttctctggggaagct
acaacacaacttccaacagcaacacagatggcaagaggagggatcttggcagatgcaatg
gggcttgggaaaactgtgatgactattgctctgattcttgcaaggcgaggcagaggtacc
cccgaggatcaagaatcgattgccaaaagtgagggtgatacagagtacatcaagaaaaag
aaaaaggaatctgatcacaaagttattagaaaagtgaaaggcggcaccctcattatatgt
cctatggcgttgcttggccagtggaaggacgaacttgaaacacactcaaaaccagatagc
atctccatttctgtcttttatggtggggataggagcagtgaccctagagtgattgctgaa
cctgacgtgatcttgaccacatacggtgtcttaacggcagcttataagaatgatggggag
aatagcattttccacagagttgactggtacagagtggttttggatgaagctcataccatc
aagtcctctaaaactctaggtgcccaggctgccttcaaattgtcatcctattgcaggtgg
tgtcttactggtacccctcttcagaacaagttggaagacctttatagcctactttgcttc
ttgcatgttgaaccatggtgcaactgggcttggtggcaaaaactgattcagaagccatat
gagagtggtgattatagagggatgaaactgatcaaggctattttgaggccactaatgctg
aggagaacaaaggattcaaaagacaaagaaggaaggcctatactggttctgcccccgact
gatatcaaaattatagagtgtgaacaatcagaagctgagcatgatttctatgatgccctc
tttaggagatctaaggttcaatttgaccagtttgtagcacaaggcaaagttcttcacaac
tatgcaaacatccttgagttgttacttcgattaaggcaatgttgcaaccacccctttctt
gtgatgagccggagtgatacacaagaatttgcagacctgaataagcttgctagaaggttc
cttgacacaaatcctgattctgcaactcagaagatcccttctagagcatatgttgaggag
gttgttgaaggtattcggaaaggtgaaaacgcagagtgccccatatgcctggagtctgca
gatgaccctgtgctcacaccatgcgcacatagaatgtgcagagaatgtcttctgtcaagc
tggcgatctccaacagctggggcatgcccaatttgcaggcaagtgtttaaaaagactgag
ataatcacgtgtccgtctgagaatcggttcagagttgatgttgagaagaactggaaggag
tcttcaaaggtctcaaagctcttggattgcttggaacggctaaggaagtcaggttctggg
gagaaaagcatcgtttttagccagtggacctcatttctagacttgttggagatacctttg
aaaaggagaagaattgggttcttgagatttgatggaagattgtctcagaagcagagagaa
atcgttttgagggagttcaatgaaactggagagaagatggtgttactgatgtcactgaaa
gcaggtggcgtaggcctcaatttaactgcagcttctaatgtgttccttatggatccatgg
tggaatcctgcagtggaggagcaagcaatcatgcgtatccaccgcattggtcaaaagagg
accgttcgagttagaagatttatagtcaaggggacggtggaagaacggttgcaacaagtc
caagccagaaaacaaagaatgatcgccggagccctcaccgacgaggaagtccggtcggcg
aggatcgaagaactcaagatgctcttccgttga

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