Coffea arabica (coffee): 113734410
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Entry
113734410 CDS
T11342
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113734410
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113734410
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
113734410
NCBI-ProteinID:
XP_027116743
UniProt:
A0A6P6WMT1
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Position
3c
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AA seq
452 aa
AA seq
DB search
MASSPSAKKWVVSVCSIMLLAVVIIVGVVASVRKFEASNLSDAELEKLQSLHNSTMAARL
EEVEAALAENAVDDPEEIASMVAMSINNSTERRKLGFFSCGTGNPIDDCWRCDPNWQKNR
KRLADCGIGFGRNAIGGRDGRYYVVTDSSDDDPVNPRPGTLRHAVIQDQPLWIVFKRDMV
ITLKQELIMNSFKTIDARGVNVHIANRACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSP
SHYGWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVM
LLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASP
TINSQGNRYLAPLNPFAKEVTKRVETAESQWKGWNWRSEGDLMLNGAYFTPSGAGASASY
ARASSLGAKSSSMVASMTSGAGVLDCRRGRTC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctccttctgcgaagaaatgggtggtttctgtttgctccataatgctgctt
gcggttgttatcatcgtcggagttgtagcttctgttcggaaatttgaagcttcaaacctg
agcgatgctgaactggagaagctgcagagcttacacaactcgacaatggcggcaaggttg
gaagaggtcgaggctgctttggctgagaacgcagttgatgaccccgaagagattgcttca
atggtggcaatgagcatcaataacagcactgagaggagaaaacttggatttttctcatgt
ggaactggtaatcctattgatgactgctggcgctgtgatccgaattggcaaaagaaccgc
aagcgccttgctgattgtggaattggttttggacgcaatgccattggcggccgtgacggc
cggtattatgttgtgactgactctagtgatgatgaccctgttaacccccggcctggtacc
ctgcgccatgctgttatccaggatcagcccctttggattgtgtttaagcgtgatatggtc
atcacactgaagcaggaattaatcatgaacagctttaaaacaattgatgcccgtggagtg
aatgtccacattgctaatcgtgcgtgcatcacaatccaatttgttaccaatatcataatt
catggactgcacatccatgattgtaaacccactgggaatgccatggttagaagctctcca
tcacattatggctggaggacaatggctgatggtgatgccatctccatcttcggttcgagc
catatctgggtagaccacaattccctctctaactgtgctgatggccttgttgatgctgtc
atgggctcgactgctattaccatttccaacaactattttacccaccacaatgaggtaatg
ctcttgggtcacagtgattcctacgtgagagacaagcaaatgcaagtgacaattgcctac
aaccactttggagagggtctcattcagagaatgccaaggtgcagacacgggtacttccat
gtggttaacaatgactacactcattgggagatgtatgccataggtggaagtgctagtccc
acaattaatagccagggaaatcgttacctcgccccgctcaacccttttgcaaaggaggta
acaaagagggtggaaactgctgaatcccagtggaagggttggaactggagatcagagggc
gacctgatgcttaatggtgcctatttcactccatctggagcaggggcctcggccagctat
gccagagcttcaagtttaggtgccaagtcgtcttccatggtcgcatcaatgacttctggt
gctggtgtccttgattgccgcaggggccgcacttgttag
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