Coffea arabica (coffee): 113734460
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Entry
113734460 CDS
T11342
Name
(RefSeq) vacuolar protein sorting 38-like isoform X1
KO
K21249
UV radiation resistance-associated gene protein
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113734460
Membrane trafficking [BR:
carb04131
]
Autophagy
Other autophagy associated proteins
Others
113734460
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ATG14
Vein_beta-barrel
UPF0515
Motif
Other DBs
NCBI-GeneID:
113734460
NCBI-ProteinID:
XP_027116811
UniProt:
A0A6P6WQ39
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Position
3c:complement(7444232..7450401)
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AA seq
388 aa
AA seq
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MDSKKKMPNSVAEEEKEKDKEVKIDEGNAKLIEWEDYQQELARFCSLTSALNEAKQKKLV
LQQKLQSLIQVEAESLNRSNELDEMREKLESRKLVMGNMSMHSKVAEEKVKKQEEQLSSE
IRSLLLAGTALSVASKQLQEANGSLAGERGYLHLKTLQKSLRVRQQYMVSQVSLLYPVKF
VIGHRHEQELESFTSSIKSGVTAGSKPLDQGSLTISGLHLTVIPFTKMSFFTDKKEVQQS
STALGYIAHAVLLIASYLQVPLRYPLRLGGSRSYIRDYAPSIEPVSSDSTSNSLVLTNAK
PVEFPLFLEGQDSTRAAYAVFLLNKLLEWLQKSPVCKHVYAFLFLWEMHAIQKCYAFPQL
FPPLLNNSCKLYFIFLFQSYIIKRNDLM
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaagaagaagatgccgaattcagtagccgaagaggagaaagaaaaagataaa
gaagtgaaaattgacgagggaaatgcgaaattaattgaatgggaagattaccagcaagaa
ttagcgcgattctgtagccttacctctgctctcaacgaagctaagcagaaaaaacttgta
cttcaacagaagcttcagtccctcatacaggtagaagctgagtcattaaatcggtcaaat
gagcttgatgagatgcgtgaaaaattggaatctcgaaaattggtgatgggaaacatgtca
atgcattcaaaagttgcggaagagaaagttaaaaagcaagaagaacaacttagtagtgag
attagatccctgttactagctggaacagctctttctgtggctagcaagcagttgcaagaa
gctaatggatcccttgctggagagagaggttatcttcatctcaaaaccttgcaaaaatca
ttaagagtgagacagcaatatatggtatcgcaagtttctttgctgtaccctgtgaagttt
gtaattgggcatcgacatgaacaagaactggaatcatttaccagcagtattaaatctggt
gttactgctggatctaaacctcttgatcaagggtccttgactatttcaggtctccatctc
actgtgattccttttacaaagatgagttttttcactgataaaaaggaagttcaacaatct
tcaacggccctcggatacatagcacatgctgtcttacttattgcttcatatttgcaagtt
cctttgcgttatcctttgcgtttgggaggttctcggtcatatattcgcgactatgcacct
tccattgagccagtgtcatctgattcaacttcaaattcattagttttgacaaatgcaaag
cctgtagagtttcctctctttttagaagggcaagactcaacaagagcagcttatgcagta
ttcttactcaataagctattggaatggcttcaaaaatcaccagtttgcaagcatgtttat
gcattcctgtttttatgggaaatgcatgcaatccagaaatgttatgcatttcctcaactg
tttcctccccttctcaataacagctgcaagttatattttattttcctgtttcagagttat
atcattaagcggaacgatttgatgtag
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