Coffea arabica (coffee): 113734861
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Entry
113734861 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K13130
gem associated protein 2
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113734861
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
113734861
SSDB
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Paralog
GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-GeneID:
113734861
NCBI-ProteinID:
XP_027117410
UniProt:
A0A6P6WQ82
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Position
3c
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AA seq
758 aa
AA seq
DB search
MADDCNSKPTVGLDRQDQLRQLSSSDLKDGVVQETFDLDQTDAVLQKADSENFEVEENRD
ERDKNAFFDVVSQEAGASSNCFDGAVLEKSEERGFEGEERDDTVWGRKGELLLHDDVVKP
EAEGKEKVEIAGAATSCFDDAVLEKSEERGFEAEMRDGTVLVGNEKVVLHDVLRQEAEGE
EKVEIAGATTSCFDDAVSEKREERGSEAETRNGTVLEGKGEQCVEEAMGAYATGLNDGVC
KNQESKPVDCETDNSVLEKGEMGVSGIQEILKIDGKLNEQNCCMKIEVVDETALVGFGKE
RKATNFSENSRKNVNHKRPRRRGKSGKTSSSGADENQKFVDMGLAQNCGTRKNDKGGKRV
YTRTELEVLRFVAVDWQSKKWTEVYCGLGPAVQEEYDGLVGSDNHSQFHHQQLQQQKKKH
TRVDFNPRFRNEARSSVFGEEYSENAENENAYENLVDPPGLHVIEQDECLEDDSDEDYSS
IQKPAFFVTGEPDFDSGPPEDGLEYLRRVRWESAQIPKVKVAKVDRTKLNKEQTVYMPLI
PDVAKCPVHLMPLKEWEDAFLADFSELRLALSRLENMEAKVQSSPTVHEGQSFSRPFDSF
LLENIDNMPFVEDSSQSVQCCTPETCGNPCSSVVANDNDGMDSVASPSSRSHTGGVSEKC
PTLSMILRMDSVARVSMLRKRVNVAESMSSLSWDDCLWLFALSAAVDCPLDADTSAAFRS
LLRKCASVRAEKLELDDEVAMLNILVTISGRYFGQLQN
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgactgcaactccaaacctaccgtcggtcttgatcgtcaagaccaactacga
cagttatcatcgtccgacctcaaagacggcgtcgttcaagaaacgttcgatttagaccaa
accgacgccgttttgcagaaggccgactctgaaaattttgaagtagaagaaaacagagat
gaacgagataagaacgccttcttcgacgtcgtaagtcaagaagccggagcctctagtaat
tgctttgacggcgccgttttggagaaaagtgaagaacgaggttttgaaggagaagagaga
gacgacaccgtttgggggaggaaaggagaactactcctccacgacgacgtcgtaaaacca
gaagctgaaggaaaagaaaaggtggaaatcgccggagccgctacttcttgctttgacgac
gccgtattggagaaaagtgaagaacgaggtttcgaagcagaaatgagagacggcaccgtt
ttggtgggaaatgaaaaagttgtcctccacgacgtcctaagacaagaagctgaaggagaa
gaaaaggtggaaattgccggagccactacttcttgctttgacgatgccgtttcagagaaa
cgtgaagaacgaggttccgaagcagaaacaagaaacggcaccgttttggagggtaaagga
gagcagtgcgtggaagaagcgatgggtgcttatgctactggcttaaacgatggcgtttgc
aagaatcaagaatcgaagcctgttgattgtgagacagacaactccgttttggagaagggt
gaaatgggcgtctctggaattcaagaaatattgaaaattgatgggaaattgaatgaacaa
aactgttgtatgaaaattgaggtagttgatgaaacggcattagtagggtttggaaaggaa
agaaaagccaccaatttctctgaaaattcaaggaagaatgtgaatcataagaggccaaga
aggaggggcaaaagtgggaaaaccagtagttcaggggctgatgagaatcagaagtttgtt
gatatgggcttggctcagaattgtggaaccagaaagaatgataaaggggggaagagagtt
tatacgaggacggagttggaggtgttgaggtttgtggcagtggattggcagagtaagaaa
tggacagaggtttattgtggacttggtcctgctgtgcaggaggagtatgatggactggtg
ggttctgataatcatagtcaatttcatcatcagcagctgcagcagcagaagaagaagcac
acccgtgttgatttcaatccgcggttcagaaatgaggcacgctcttcagtttttggtgaa
gaatattcagaaaatgcagagaatgaaaatgcatatgaaaatctggtagatcctcctggt
cttcacgtaattgagcaggatgagtgcttagaagatgatagtgatgaagactatagtagc
attcagaaacctgcgttttttgttacaggtgaacctgattttgattcaggccctccagaa
gatggtctagaatatcttagacgtgtaaggtgggaatctgcacagatacccaaagtgaaa
gttgccaaggttgatagaactaaactaaacaaggagcaaactgtttacatgcctctaatt
cctgatgtagcaaagtgtccagtgcacttaatgccactcaaagagtgggaggatgcattt
cttgccgatttctctgagttgaggctggccttatcaagacttgaaaatatggaagctaag
gtgcagtcatctcccactgttcatgaaggacaatccttctccaggcccttcgatagcttt
cttcttgaaaacatcgataatatgccttttgtggaagattcaagccaatctgtgcagtgc
tgtacacctgaaacatgtggcaatccatgctcttctgttgtcgccaatgataatgatggt
atggattctgtagcaagtcccagttctagatcgcatacaggtggagtttctgaaaaatgc
cccaccctgtctatgattttgcggatggactctgtagctcgagtttctatgctgaggaag
cgtgtaaatgtggcagaaagtatgagtagtctatcttgggatgattgtctatggctattt
gctttgtctgcagcagttgattgtccccttgatgccgacacttctgcagcctttaggtca
ttgttgcggaagtgtgcaagcgtgcgagcagagaagttggaattggatgacgaagttgcc
atgcttaacattctggtaaccatatctgggagatacttcggacaactacaaaattaa
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