Coffea arabica (coffee): 113735135
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Entry
113735135 CDS
T11342
Name
(RefSeq) U1 small nuclear ribonucleoprotein A isoform X1
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113735135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113735135
Spliceosome [BR:
carb03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
113735135
Complex B
113735135
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_YTH1
xRRM
DUF4523
Calcipressin
DUF1866
Motif
Other DBs
NCBI-GeneID:
113735135
NCBI-ProteinID:
XP_027117900
UniProt:
A0A6P6WRF8
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All DBs
Position
1e:56485318..56488874
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AA seq
247 aa
AA seq
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MAELTAATPGSDIPQNQTIYINNLNEKIKLDELKKSLKAVFSQFGKIVEVLAFKTLKHKG
QAWVVFEDVSSATSALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKKSDDR
GRKKKDQHDANQAGMGLHPAYTSPYGATPPLSQLPYMAGSKAAMPEAPAPPNNILFVQNL
PHQTTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYENEIQSTVAMQALQGFKITAENPM
LITYAKK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgacggcggcaaccccagggagtgatattcctcaaaatcagactatttac
attaacaatctaaacgagaaaatcaagctcgacgagctgaagaaatcactgaaagcagtt
ttctcacaattcggaaagatagtggaagtattagcgttcaaaaccctcaaacacaaagga
caggcttgggtggtattcgaggacgtttcttctgctaccagtgcgcttcgccaaatgcag
ggctttccattctacgacaagcctatgagaatacaatatgcaaagacaaaatcagatgtc
gtagcaaaggccgatggcacttttgtacctcgagaaaaaagaaagaagagcgatgacaga
gggaggaagaaaaaggaccagcatgatgcaaatcaagctgggatgggtctccatcctgca
tatactagtccctacggggcaacacctccgttgtcacagctaccatacatggctggttct
aaagctgctatgcccgaggctcctgcaccaccaaataatattctgtttgtccagaatctc
cctcaccagacgactccaatgatgctgcagatgctcttctgtcaatatccgggctttaaa
gaagttaggatggttgaagcgaaacctggtattgcttttgttgagtatgaaaatgagata
caatcaactgttgcgatgcaggcacttcaaggtttcaagatcacagcagagaatcccatg
ttaataacttatgcaaagaagtaa
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