Coffea arabica (coffee): 113735603 Help Entry 113735603         CDS       T11342                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism carb  Coffea arabica (coffee) Pathway carb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:carb00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     113735603  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:carb03400]     113735603 DNA repair and recombination proteins [BR:carb03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      113735603 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor Tudor_KDM3B nSTAND_NTPase5 Motif Other DBs NCBI-GeneID:  113735603 NCBI-ProteinID:  XP_027118401 UniProt:  A0A6P6WUQ6 LinkDB All DBs Position 1e:56112995..56124117 Genome browser AA seq 1300 aa AA seqDB search MAPSGRRTSNGRSPPVNQQQQITSFFSKKTSSSSSPSPTAPPLFSTPKLTTKKPSPTTDC SPSSSPFTPSPLETRPKKPLLVIRPSSPSASASPMKSYGPEVVDKRIRVYWPLDQSWYHG CVKHFDEISGKHLVLYDDADEELLNLAEEKIEWPVEEVPVRGRFRRLRRISIVEDDEEND CVEKESGGNDDEESGWNAAEREVVEDVPVGMELEEDYDGVCSGKITSGRSSKRKMGGAAK LGANSSKKIKNVGDTEQIDSKISCHVKGENLIEPAGNNVISEKGIDSCRTSIDVAEERFG AREAGKLWFLGKDRRDANRRRPGHVDYDPKTLYLPPEFLKRLSDGQRQWWDFKSKHMDKV MFFKMGKFYELFEMDAHVGAKELDLQYMKGDQPHCGFPEKNFSMNVEKLARKGYRVLVVE QTETPEQLEMRRREMGSKDKVVKREICAVVTKGTLTEGEMLSANPDAAYLMSLIENFPSS GNQLAQPIFGVCVVDVATSKIMLGQFRDDSDCSILCCLLSELRPVEIVKPAKLLSPETER LLLRHTRNPLINDLLPLSEFWDGEKTINEVNCIFQRINNQTCSLSQSGAVSHAIQSSVKD GGECLPDILAELLAAGENGSYALSALGGILFYLKKAFLDESLLRFAKFESLPCSGLGNIS QMPYMVLDAAALENLEIFENSRNGDSFGTLYAQMNHCVTAFGKRLLKKWLARPLCHVELI HERQDAVAGLKGVNLPFVLEFRKELSRLQDVERLLARIFASSEAIGRNAKKVILYEDAAK KQLQEFISALRGCELIYHACSSLASILENVDSRLLHHLLTPGKGLPDVRSVMKHFKDAFD WVEANNSGRIIPRKGADKEYDDACKNVREVESNLMEHLKEQRRLLGDASVNYVTVGKDAY LLEVPESLCRRTPRDYELQSSKKGFFRYWTPVIKKLLGELSQAESEKESKLKSIFQRLVG RFSAHHNMWRQLVSTAAELDVLISISIACDYYEGQACRPIITGSSSPDAVPCLTAKSLGH PTLRSDSLGKGGFVPNDVTLGGSEHAGFILLTGPNMGGKSTLLRQVCLAVILAQVGADVP AQSFVMSPVDRIFVRMGARDHIMAGQSTFLAELLETASMLSLATRNSIVALDELGRGTST SDGQAIAESVLDHFAHKVHCRGMFSTHYHRLAIDYERDPKVSRFHMACQVGRGIEGLEDV TFLYRLTPGACPKSYGVNVARLAGLPDAVLQKATLKSRDFEETYGRIKGPKDIFSTHQKE ELKNVMKNLSTIVANNSCHQSAVSTLAELQGKARLLLERS NT seq 3903 nt NT seq  +upstreamnt  +downstreamnt atggcgccttctggtcgtcggacgagcaatggccgatcaccgcctgtcaatcaacagcag cagatcacctctttcttctccaagaagacatcatcgtcgtcatccccatcaccaactgct ccccccttattttccacccccaagctcaccactaagaaacctagccctaccactgactgt agccccagctccagcccgttcactccttcacctctcgaaaccagaccaaagaaaccctta ctagtcatccgcccttcctcaccttctgcttcggcttctcccatgaaatcctacggacct gaggttgtcgataaaagaattagggtttactggccgttggaccagtcgtggtaccatggc tgcgtcaaacatttcgatgaaatctctggtaagcatttggttctctatgatgatgcggat gaggaattattgaaccttgccgaggaaaagattgagtggccggttgaggaggtacctgtc agggggaggttccgccgtttgcgacggatttcaattgtggaagatgatgaggagaacgac tgtgtggagaaggagagcggtggcaatgatgatgaggagtcgggatggaatgctgcggaa agagaggtggtcgaggatgttcccgtgggcatggaattggaggaggattatgatggagtg tgtagtggaaaaataactagtggaagaagcagtaagcgtaagatgggtggggcggcgaag ctgggtgctaattcttctaagaagataaagaatgttggagataccgagcaaattgacagc aagatttcttgtcatgtcaagggtgaaaatttgattgaacctgctgggaacaatgtaatt agtgagaagggtattgatagttgtagaacttcaatagatgttgccgaagaaagattcggt gcacgcgaagcaggaaagctgtggttcttggggaaggaccgtagggatgccaatagacga cgtcctggacatgtggattatgatccaaaaactttgtacttgccgccggagtttttaaaa cgtttatcagatggccagagacaatggtgggactttaagtcaaagcacatggacaaggtt atgtttttcaagatgggcaaattttatgaactctttgaaatggacgcacatgttggtgcc aaagagctggatttgcaatacatgaagggagatcaacctcattgtggctttccagaaaag aacttctcaatgaatgtggaaaaactggcaagaaagggttatcgtgttcttgttgtggag caaacagaaacacctgagcagcttgagatgcgtcgcagagagatgggctctaaagataag gttgtaaaacgtgaaatatgtgctgtagtcacaaaaggaacattaacagaaggagaaatg ctctcagcaaaccctgatgctgcttatttgatgtcattgattgaaaactttccaagctca ggaaatcagcttgcacagccaatattcggtgtatgtgtggttgatgtagccacaagcaag attatgcttggacagttcagggatgattcagactgcagcatcctgtgttgtctattatct gagttaaggccggtggaaatcgttaaacctgctaaactgctaagccctgagacggagaga ctacttctacgacatacacggaatcctttaattaatgatttgcttcctctttcggaattc tgggatggagagaaaaccataaatgaagtaaattgtatttttcagcgaattaataatcag acatgttctttatctcaaagtggtgcagtgtcacatgcaattcaatcttcagttaaagat ggtggggaatgcttgccagacattttggctgagcttctggctgcaggggagaacggaagc tatgcactctcagctcttggaggcattcttttctacttgaagaaagcttttctggatgaa tctctacttagatttgcgaagtttgagtcactcccgtgttctggtttgggtaatatttct caaatgccatacatggttttggatgcagctgctttggagaatcttgagatttttgaaaac agcagaaatggagatagttttgggacattgtatgcacagatgaaccattgtgtgacagct tttggcaaaaggttacttaaaaaatggcttgcaaggcctttgtgtcatgtggaattgata catgaacgccaggatgctgtagcaggactaaagggagttaatctacctttcgtccttgag ttccgaaaagagttgtccaggcttcaagatgttgagcgtttgcttgcacgcatcttcgca agcagtgaagccattggaaggaatgcaaaaaaagtaatcctgtatgaggatgcagcaaag aagcagcttcaagagtttatatcagctttgcgtggatgtgaactcatttatcatgcatgc tcttcacttgcttcaattttggaaaatgtggattcaaggctattacatcatttattgact cctggtaaaggtcttcctgatgtacgttcagttatgaaacacttcaaggatgcttttgac tgggtggaagcaaataattctggtcgtataattcctagaaaaggggctgataaagaatat gatgacgcctgcaaaaatgtcagggaggtggaatctaatttgatggaacatttgaaggaa cagcgcaggttacttggagatgcatctgtcaattacgttacagtggggaaagatgcctac cttttggaagtgccagaaagtttgtgcaggaggactccgcgtgattatgagttacaatca tctaaaaagggttttttccgttattggacccccgttatcaaaaagttgttgggtgagctg tcacaggcggaatctgaaaaggaatccaagttgaaaagcatcttccagaggttggttgga agattcagtgcgcatcataatatgtggagacagttggtttctactgctgcagagctggat gttttaattagcatctctattgcatgtgactactatgaaggacaagcttgtcgtccaatt attactggctcatcgtctccagatgcagtgccctgccttactgccaaaagtttagggcac cctacccttagaagtgattctctaggcaagggtgggtttgtccccaatgatgttactctt ggtggttctgaacatgccggctttatcttgctcactgggcctaacatgggtggaaagtca actcttctgcgtcaagtttgcttggctgttattctggcacaggtcggagcagatgtacca gctcaaagctttgtcatgtctcctgttgaccgcatctttgttcgaatgggtgcaagagat cacattatggcagggcaaagtacattcttggcagaacttttagaaactgcatctatgctg tcattggcaactagaaattcaattgttgcattggatgagcttggacgaggaacgtcaact tcagatggacaagcaatagctgaatctgttcttgatcactttgcccacaaggtacattgt cgaggaatgttctctactcattatcatcgattggctattgactatgagagagatcccaag gtttcccggtttcacatggcatgccaagttggcagaggaattgaaggtctggaggatgtt acatttctttacaggttgacccctggtgcgtgccccaaaagttatggtgtcaatgttgca aggctagctggacttcctgatgctgtgctccaaaaggccacattgaagtctcgagatttt gaggaaacctatgggagaataaagggaccgaaggacatattttcaactcatcagaaagag gagctgaaaaatgtgatgaagaatttatcaaccattgtggccaacaacagttgccatcaa agtgcggtttctacgctagccgaactgcaaggaaaagcaaggttacttctagaacgaagt taa

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