Coffea arabica (coffee): 113735620
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Entry
113735620 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X3
KO
K11797
PH-interacting protein
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113735620
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113735620
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113735620
NCBI-ProteinID:
XP_027118419
UniProt:
A0A6P6WSL7
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Position
1e:56092017..56108231
Genome browser
AA seq
1614 aa
AA seq
DB search
MDFQKCPSWSDVPSTKMAPLNFVNKVHAVSRLEEQEGSDNHLAAANVDVDIREVYFLIMR
FLSTGPCQKTFTQILDELLEHELLPRRYHAWYSRSGAQSGHENDDGVSFPLNYDNLVKRF
PHIEDDHLVKLLRQLMLSTSTPLPCIVGRTVPSASDVPTLLGTGSFSLLCSDRNSVSKQV
KHVASYLRWPHMLADQVRGLSLREIGGGFSKHHRAPSVRFASYAVAKPSMMVQKMQNIKK
LRGHRDAVYCAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNI
LVASASNDYSIRVWRLPDGFPISVLQGHTGAVTAIAFSPRPSSVYQLLSSSDDGTCRIWD
ARSSDCSPRVYLPTPLEVVSGKTSSLPLANVPSSSNVSQCHQILCCAYNANGTVFVTGSS
DTHARVWSACKSNSDDPEQPSHEIDLLAGHENDVNYVQFSSCAVASRSSASDFSTEENIP
KFKNSWFSHDNIVTCSRDGSAIIWTPKSRRSQGKVGRWIRAYHLKVPPPPMPPQPPRGGP
RQRFLPTPRGVNMIVWSLDNRFVLAAIMDNRICVWNASDGSLVHSLTGHTASTYVLDVHP
FNPRIAMSAGYDGKTIVWDIWEGIPIWTYEIGRFKLVDGKFSQDGTSIVLSDDVGQIYLL
NTGQGEAQKDAKYDQFFLGDYRPLVQDTHGNTLDQETQVVLYNRNIQDPLCDSSMIPYPE
PYQSAYQRRRLGALNIEWRPSSSKLAVGPDIGLGQEYQVLPLADLDLVVEPVPEFADMMY
LEPENDVIHNETDSEYYITDEYTSEDEEEHSSDNSSSDPECSEENTVGRSQKDGLRRSIR
KKSLSEVEPMSTSGRHVKKRILHGNDVPLSKSKRTKRSRSGRKYTSKRKSAEVKLTRSQR
LAARNAINGFSHISEISTDGEEDESPEGDSSGNNSSFLSTNIKTQQPVDYLPNVKRYLAG
DQGSLNESETAVTCPPTNVGNKKKLVLKLTLNNSKKSLPPEHIRSQSADHTVTASYPSKD
SGSSYTGVTKLLEGKELENIEEDLTTIAGCEQTKVHLGEAKVQSTNWMRSPHPVPADLCY
GSKLSSNCHSETCSIKHCIKPEDDCSNFRAGLEIVNHKPLSKAYNEKQEREASVSEDADG
VKVIDQNLGKGGENISDTYPCRNCDLVDGKNHSGGLNEIKKPKPTILKIKSKKISGHSFP
MEQNNLPSMPEDYKTALYEGTCASIYKGDEFPDIATDEMRRKRSLRLKATTRETGVLKQK
SIEKPSGGALNHLPSRGMPMSKQTSNHGSARNKGEGYNNEVRSALHALQQKSNWLLLSEQ
EEGYRYIPQLGDEVMYLRQGHQEYMKSVNSLEQPPWTRYGGNIRSVEVCLVEELDYSTIA
GSGESGCRITLKFIDPSSEVNEHKFKLNLPELIDFPDFVVERTWYEASMNRNWTCRDKCL
VWWRDESEEGGSWWDGRIISIKDKSSEFPDSPWERYVIKYKSASEDLHLHCPWEMHDPSR
QCEHPCIDPEVRNKMLASVNRLLQSASRNQDQYGILKLDEVSQKDDFINKFPVPLSPDVI
KLRLENNYYRTLDSLKHDIRVMLTNGQSYFARSKELSAKMCRLSDWFHKKFLKI
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaagtgcccatcttggagtgacgtgccttctacaaaaatggcccctttg
aattttgttaataaggtccatgcagtctctcgattggaagagcaggagggttctgataat
catcttgctgcagcgaatgtagatgttgacattagagaagtttattttctgattatgcga
tttttatcaactgggccatgccaaaaaacttttacacaaattttagatgaacttttagaa
catgaacttctaccaaggagatatcatgcttggtattcaagaagcggagcacaaagcggt
catgaaaatgatgatggcgtatctttccctttaaactatgataatctagtcaagaggttt
cctcacattgaagatgatcacctggtaaagctgcttagacaactgatgttgagcacttcg
actccattaccttgcattgttggaagaactgttccaagtgctagtgatgtgcccactctt
cttggaactggctccttttctcttttatgcagtgatagaaatagtgtcagcaagcaagta
aaacatgttgcttcttatctccgttggcctcacatgctggcagatcaggtccgtggacta
agtttgagagaaattgggggtggtttttcaaaacaccatcgggctccatcagttcgcttt
gcctcttatgctgtagctaagccgtcaatgatggtgcagaagatgcaaaatataaagaaa
ctaaggggacacagagatgctgtgtattgtgcaatatttgatcgctctggaagatatgtc
attactgggtcagatgatcgtcttgtcaagatatggtccatggaaactgcattttgtcta
gccagttgtcgaggtcatgaaggtgacataactgacttagctgttagctcaaacaatata
ttagtagcatctgcttccaatgactacagcattcgtgtttggcgattgccagatggattt
ccaatttcagttctgcaaggacatacaggagctgttactgccattgcattcagtcccagg
cctagctctgtctatcaacttttatcgtcttcagatgatgggacttgcaggatctgggat
gcaagatcctcagattgtagtccacgtgtttacttgccaacgccattggaagttgtttct
gggaagacaagcagcctccctttggctaatgtgccttcctcaagtaatgtatcccagtgc
catcaaatcttatgctgtgcctacaatgcgaatggaactgtctttgtcactggaagctct
gatactcatgctagggtgtggagtgcttgtaaatccaattcagatgatccagagcaacct
agtcatgagattgatttgctagctggccatgagaatgatgtcaactatgtgcaattcagt
agctgtgctgttgcttccaggtcttcagcatctgatttttcaactgaggagaacattcca
aaatttaaaaattcttggtttagtcacgacaacattgttacctgctcccgtgatggcagt
gctattatttggacccctaaatcacgcagatctcagggtaaagtgggacgttggatacga
gcataccatctaaaagttcctcctccaccgatgcccccccaacctccccgaggaggtcca
cgccagagatttcttccaactcctcgtggtgttaatatgatagtgtggagcctggataat
cgctttgtgctggctgctattatggataatagaatatgcgtttggaatgctagtgatggt
agcttggtacattccttgactggtcacacggcatctacttatgttctggatgttcatccc
ttcaatcccagaattgcaatgagcgctgggtatgatggaaaaactattgtttgggatata
tgggaaggcattcctatttggacatatgagattggacgttttaaattggttgatgggaag
ttttcacaagatggaacatcgattgtactctcagacgatgttggacagatatatttgcta
aacacaggccaaggcgaagcgcagaaggatgctaagtatgatcagttcttccttggagat
taccgccctcttgtccaggatactcatggcaatactcttgatcaggagacacaagttgtt
ctgtataataggaatatccaggaccctctttgtgactcaagcatgattccttatccagaa
ccttaccagagtgcataccagcgtcgtcgactaggtgcactgaatattgagtggcgtcct
tcatcttctaaacttgctgttggtccagatattggtttggggcaagagtaccaagtttta
cctttggctgacttggacttggtggttgagccagtgcctgagtttgcggatatgatgtat
ttggaaccagaaaatgatgtcatacacaatgagacagactcagaatactacattactgac
gaatatactagtgaagatgaggaggagcattcaagtgacaattcatctagtgatccagaa
tgtagtgaagaaaatacagtgggaaggagtcagaaagatggtcttcgcagatcaataagg
aaaaaatccttgtcagaagttgagccaatgtctacatctgggaggcatgttaagaagagg
attttgcatgggaatgatgtccccttgtctaagagtaaaagaacaaagaggtcaagaagt
ggccgaaaatatacttcaaagaggaaatctgcggaagtgaaattaacgaggtcacaacgt
ttagcggcaaggaatgcaattaatggtttttcacatatttctgaaatttctactgatgga
gaagaggatgagagcccagaaggtgattcatcaggaaacaattcatcgttcctcagtaca
aacatcaagacccagcaacctgttgactatctgcccaatgtgaagaggtatttggctggg
gatcaaggatctttaaatgagtccgagactgcagtcacgtgccctccaacaaatgtggga
aacaagaaaaagttggttttgaagctcacccttaacaactctaagaaatctttgccgcca
gaacatatcagaagccaaagtgctgaccatactgtcacagcatcatatccttcaaaagat
tcaggttcttcttacactggggtaactaaacttctggaaggtaaagaacttgaaaacatt
gaggaggacttgacgacaattgcaggttgtgagcaaaccaaagttcatttgggggaggcg
aaagttcagtcaacaaactggatgcgttcacctcatccagtgcctgcagatttatgctat
ggtagcaaattgagttccaattgccactctgagacctgtagcatcaaacattgtatcaaa
cctgaggatgactgcagcaattttcgagctggtttggaaattgtaaaccataagccgtta
agtaaggcttacaatgagaagcaagagcgtgaggctagtgtatcagaggatgcagatggt
gtaaaagttattgaccaaaatcttgggaaaggaggagagaacatttctgatacttatcca
tgtagaaattgtgatttggttgatggcaaaaaccactccggtggtttaaatgaaatcaaa
aaaccaaagccaactatcctaaagattaaatcaaagaagatatctggacattcctttcct
atggagcagaataatcttcccagtatgccagaagactataaaactgcattatacgaaggt
acttgtgccagtatctataagggagatgaatttcctgatattgctactgatgaaatgcgt
aggaaaagatccttgaggttgaaggcaacgacaagggagacaggtgttcttaagcagaaa
agcattgagaagccatctggaggagcacttaaccatcttccttcgagagggatgccaatg
tcaaaacagaccagcaaccatgggtctgctagaaacaaaggagaaggctacaataatgaa
gtcagaagtgcactacatgctttacagcaaaaatcaaattggttgttgttgtcggagcag
gaggaagggtatcgttacatccctcaacttggtgatgaagtaatgtacttaagacagggt
catcaagaatatatgaagtctgttaactcattagaacaacccccttggacgaggtatgga
ggaaatattagatctgttgaagtttgtttggttgaagaactggattactcaacaattgca
ggttctggggagagtggttgtagaattactcttaaatttatagacccttcatcagaagtg
aatgaacataaatttaaactcaacctgcctgaactgattgattttcctgattttgttgtc
gaaagaacatggtatgaagcctctatgaatagaaactggacctgtagagataaatgtttg
gtttggtggagggatgagagtgaggaaggtggtagttggtgggatggtcgaataatttcc
attaaagacaagtcttcggagtttcctgacagtccatgggagagatatgttattaaatac
aagagtgcttcggaagatttgcatcttcattgtccctgggagatgcatgatccatcccgt
cagtgtgagcatccctgtattgatcctgaagtaagaaacaaaatgctggcgtctgtaaat
agattactgcaatctgcaagcagaaatcaggatcaatatgggattctaaagttggatgaa
gtttctcagaaggatgactttataaacaagtttcctgttccattgtcacctgacgtaatc
aagttaaggttagaaaacaactactacaggaccttggattctttgaagcatgatatcagg
gtgatgttaacgaatggtcagagttactttgcgagaagcaaggagctttcggccaagatg
tgccggttgtctgattggtttcacaagaaattcttaaagatatga
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integrated database retrieval system
