Coffea arabica (coffee): 113735891
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Entry
113735891 CDS
T11342
Name
(RefSeq) SWR1-complex protein 4-like
KO
K11324
DNA methyltransferase 1-associated protein 1
Organism
carb Coffea arabica (coffee)
Pathway
carb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113735891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113735891
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
113735891
NuA4 complex
113735891
Chromatin remodeling factors
SRCAP complex
113735891
SWR1 complex
113735891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SANT_DAMP1_like
DMAP1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
PRC2_HTH_1
Motif
Other DBs
NCBI-GeneID:
113735891
NCBI-ProteinID:
XP_071922631
UniProt:
A0ABM4VSX8
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Position
1e:55885480..55891395
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AA seq
462 aa
AA seq
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MDAKDILLGLPKPTTTPTPHGHQLLPLPADKKSRPPKESQRKPDGISREVYALTGGLAPL
MPSVDVNHLKRRAQSENEKITWQWLPFTSSARKDNLQLYHWVRVVNGVPPSGDYSFAKYN
KSVDVIKYTDDEYEKHLTDPMWTKEETDELFDLCERFDLRFIVIADRFPTSRTVEELKSR
YYSVCRAILIARAPAPGDIAGHPLVKDAYNISQDVERKRALSMVLSQTKQQERRDAEVLA
EAKRISEARKAAKGTDELEVPAMTDTVPDDNDGAAAAVDSLSPSPNAQFTSGAIAPPVSE
IASTLASLRMMRVYLRTHALEQMVQAASSSAGLRTIKRVEQTLQDLGVNLKPKVPTKAVC
AEHLELRKEILTLLNLQKQLQYKEAEGSSYRDGLYAETPGTPPKRVQRAVEQDRTFVPDS
FSFGGERMGKRDQKRKAPGRLLEGPPSPAQSKRPRKFKASDG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggatgctaaagacatcctattaggattgccgaagccgacaacgacgccgacgccgcat
ggacatcagctgctgcctttaccggccgacaagaagtcgaggcctccaaaagaatctcaa
agaaaacccgatggcatctccagagaggtttacgcccttacagggggcttggcacctctc
atgccttcggttgatgtcaatcacttgaaacgtcgagctcaatcagagaacgagaagatt
acatggcagtggctccccttcacaagttctgcacgaaaagataatttgcagttgtatcat
tgggttagagtagtaaatggagtgccgccaagtggtgactattcatttgccaagtacaac
aagtccgttgatgtgatcaagtacacagatgacgagtacgagaagcacctcactgatcct
atgtggaccaaggaagagactgatgagttgtttgacttgtgtgagcggtttgatctccgc
tttatcgtgatagctgatagattccctacatcacggactgttgaggagctaaagagtcgg
tactatagtgtatgtcgagctatcttgattgctagagctcctgctcctggtgacattgct
ggacaccctctcgtgaaggatgcttacaatatttcacaagatgttgaacgtaaacgtgca
ctatctatggtgctttctcaaacaaagcagcaagaacgaagagatgcagaggttcttgcg
gaagcaaagagaatctctgaggcacggaaggccgcaaagggtactgatgagttggaggtg
ccagctatgactgatactgttccagatgacaatgatggggctgctgctgctgtagattct
ctgtcaccatctccaaatgctcagttcacatctggtgctattgcacctcctgtttcagaa
attgcttcaactttagcatctcttcgcatgatgcgggtgtatttgagaacgcatgcttta
gagcagatggtgcaagctgctagctcgtcagcaggactcaggactattaagcgcgttgag
caaactttacaagatcttggggttaatttgaaaccaaaagtcccaactaaagctgtttgt
gcagagcatcttgaactgaggaaagaaattttgactctattgaatcttcaaaagcagttg
caatacaaagaggcagaaggctcatcttatcgtgatggtttatatgctgaaacacccggc
acaccgcctaagcgtgtacagcgtgctgttgaacaggaccgaacctttgtaccagattca
ttcagttttggaggtgaaagaatggggaaaagggatcagaagcgtaaggctccgggaaga
ttgttagaaggtccaccatcacctgctcagtcaaaaaggccacggaagttcaaagcttca
gatggataa
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