Coffea arabica (coffee): 113736218
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Entry
113736218 CDS
T11342
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113736218
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113736218
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
VacA2
ZirS_C
Beta_helix_3
Motif
Other DBs
NCBI-GeneID:
113736218
NCBI-ProteinID:
XP_027118890
UniProt:
A0A6P6WU55
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Position
3e
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AA seq
392 aa
AA seq
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MEKPIGLFVVTFLSFLLNQSMAIVGRYNVLELGAKADGNTDSTESLLSAWAAACGSSKPS
TILVPKGRFLVKRVQFSGPCKNKVINFRIRGTLVAPSDHEVLGNAGYWLHFQNVDGVTIH
GGILDARGAGLWACKAAGNGCSSGGATTLGFTNSNNIAITRLTSLNSQMYHLVFIGCNQV
KLQKIKVLAAGNSPNTDGIHVQFSSGVAILSSRISTGDDCVSIGPGTTNLWIENVFCGPG
HGISIGSLAKDFEEEGVQNVTVKRVKFRNTQNGARIKSWGRPSKGFVKDVLFQHVTMINV
QNPIVIDQNYCPSHINCPGQVSGVKINDVTYRDIHGTSATEVAVKFDCSNKYPCSAIRLE
DVKLTYKNQKAKSSCANAAGTALGLLEPASCF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcccatcggtctttttgttgtcacatttctctccttcttgttaaatcaatca
atggccattgtgggaaggtacaatgttctggaattgggagcaaaggctgacgggaataca
gattcaaccgagtctctgttgagtgcatgggcagcagcttgtggctcttccaaaccatcc
acaattcttgtaccaaaagggaggtttttagtcaagcgagtacaattctctggaccatgc
aagaataaagtcataaactttcgaattcggggtacccttgtggctccttcagatcatgaa
gttcttggaaatgctggttactggcttcactttcagaatgttgatggagtcaccattcat
ggtggcattctggatgctcgaggtgctggtctctgggcttgcaaagcagccgggaatggg
tgttctagcggcggcgcgacgacgctaggattcaccaactcaaacaacattgccattacc
aggctcacttctctcaacagccaaatgtatcacctggtattcatcggttgcaatcaagtc
aagttgcaaaagattaaagttttggcagccggaaacagccccaacacggatggaatacac
gtccagttttcatctggggtggcgattttgagctctaggatcagcacaggagatgattgt
gtctcaattggccctggcaccactaatttgtggattgagaatgttttttgcggccccggc
cacggcattagcattgggagtctagcaaaagattttgaagaagagggagtacagaatgtg
acagtaaaaagagttaaattcaggaatacacaaaatggtgcaagaattaagtcatggggt
aggccaagcaaaggattcgtgaaggatgtcctattccagcatgtcactatgatcaatgtc
caaaaccccattgttatcgaccaaaattattgcccaagtcacataaattgtcctggccag
gtttcgggcgtaaaaataaatgatgtaacatatcgcgacatccatggaacatcagcaaca
gaagttgcagttaaatttgattgtagcaacaagtatccatgcagcgcaataagattggaa
gatgtgaagttgacatacaaaaatcagaaagctaaatcatcttgtgccaatgctgctgga
actgcacttggtttgcttgagcctgcaagctgtttctag
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