Coffea arabica (coffee): 113736243
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Entry
113736243 CDS
T11342
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13 isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113736243
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113736243
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
Helicases
113736243
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Other DBs
NCBI-GeneID:
113736243
NCBI-ProteinID:
XP_027118927
UniProt:
A0A6P6WZL2
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Position
3e:5947725..5958800
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AA seq
817 aa
AA seq
DB search
MASGPSSGRNNQTKKKLKKEKKRAGVKSEEQLERFDSLPWNPSLPDKDDAYSFLIGSNEL
EGGFLSLEEIDETEYALDIPKPQNESAKKILKRKSKSKKRKVSEHDDSSVAEDEGGNEER
PEEEEVVEGELKELKQNKKRKKKKKNNTQKKGKLENAAEENAELAAVADGKEDVDEESVD
ESEYLAWNELRLHPLLMKSIHRLKFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAF
GLPILQRLLEERDKVEKLISEYQEADERIASRGFLRALIITPTRELALQVTDHLKEVAKP
TNVRVVPIVGGMSTEKQERLLKSRPEIVVGTPGRLWELMSGGAVHLTELHSLSFFVLDEA
DRMIENGHFRELQSIIDMLPVTSGSDDAQSHNTESCVTVSSLQRKKRQTFVFSATIALSA
DFRKKLKRGSLKSKPNDGLNSIETLSERAGMRASAAIIDLTNASILAHNLEESFIECKEE
DKDAYLFYLLSLHGQGRTIIFCTSIAALRHISSILRILDINVWTLHAQMQQRARLKAVDR
FRATEHGILIATDVAARGLDIPGVRTVIHYQLPHSAEVYVHRSGRTARALSDGCSIALIS
PNETSKFAGLCKSFAKENFRRFPIDISYMPEVMKRLSLARQIDKILRKDSQEKAKKSWLE
RNAESIELVLDDNDSEDERVNKHKQKKASSAHLKKMQQELNTLLCRPLQPKTFSNRFLAG
AGVSPVLQNQFEELARQKLADSNTSAQNKRRKLVIIGQDCVEPLQALRSTGEEACQDLKE
IAEKRKNMENLRRKRKEEKKRLHDQRRKQRKKLKGGS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgggccttccagcggcagaaataaccagaccaagaagaagctaaagaaagaa
aagaaacgagccggagttaaatcggaggagcaactcgaacggtttgattcacttccctgg
aacccatctctccccgataaagacgatgcttattctttccttattggctccaatgagctc
gaaggaggatttctgtcgctcgaagaaattgatgagacagagtatgcattggacattcca
aagccccaaaatgaaagcgcaaagaaaatattgaaaaggaagtcaaaatcgaagaaaagg
aaggtaagtgaacatgatgacagttctgtggctgaggatgagggtggaaatgaagagaga
cctgaagaggaggaggtggtggagggggaactgaaagaattgaaacaaaataagaagaga
aagaagaaaaaaaagaataatactcaaaagaagggtaagttggaaaatgcagctgaggaa
aatgcagaactagctgccgttgccgatggcaaggaggatgttgatgaggaatcggttgat
gaaagtgaatacttggcatggaacgagcttagacttcatcctctgctaatgaaatcaata
cacaggctgaaatttaaagaaccaacaccgatacagaaagcatgtattcctgctgcagct
catcaaggaaaggatgttgttggtgctgcagagactgggtctggtaaaacacttgcattt
ggtttgcccattctacaacgacttctagaagaacgagacaaagttgagaagctgatttca
gaatatcaagaggcagatgaaagaattgcttcaagaggctttttacgggctctcataatt
actcctactagagaacttgcacttcaggtcacagatcatctcaaggaagttgcaaagcct
accaatgttagggtggtgcccattgttggtgggatgtcaacagagaaacaggaaagacta
cttaaatcaaggcctgagattgttgttggaactccagggagattatgggagctcatgtcc
ggtggagcggttcatcttacagagcttcattcgctgtctttttttgtgctggatgaggct
gatcgcatgattgaaaatggccattttcgtgagttgcagtccataattgatatgcttccg
gtgactagtggatcagatgatgctcaatctcataatacagaaagctgtgttacagtttca
agcttgcaaagaaagaaaagacaaacttttgttttctctgctactattgcgctttctgct
gattttcgtaagaagctaaagcgtggatccctgaagtctaagccaaatgacgggttaaat
tccatagaaactctctctgagcgagctggaatgagagcaagtgctgcaattattgatcta
accaacgcctcaattctggcacataatttggaggaatcatttattgagtgcaaggaagaa
gataaagatgcttatttattctatctattaagcctccatggacaaggccgaaccattatt
ttctgcacatcaattgcggctttacgccacatttcttccattctgcgcattcttgacata
aacgtttggaccctgcatgcccaaatgcagcagcgagcacgccttaaggcagttgatcgt
tttcgtgctactgagcatggtatacttattgccactgatgttgcagcaagaggacttgat
attcctggtgtacgaaccgtcattcactaccagcttccacattcagctgaagtttatgtt
catagaagtggaagaacagccagggctctttctgatggatgcagtattgctctaatctcc
ccaaatgaaacatcaaaatttgctggtttgtgcaaatcatttgcaaaggaaaattttcgg
agatttcctatagacatttcatacatgccggaggttatgaaacgattatctcttgctcgt
caaatagataaaatcttgcggaaagactcccaggaaaaagccaagaagagctggcttgag
aggaatgcagagtcaattgaattagttctagatgataatgatagtgaggatgaaagagtg
aacaaacacaaacagaagaaagcctcttctgctcacctaaaaaagatgcaacaggagttg
aatactcttctctgtcggccattgcaacccaaaacattttcgaatcgcttcttggcaggg
gctggtgtttcacctgtccttcaaaaccaatttgaggaattagctaggcagaaacttgca
gattcaaatacttcagcacaaaacaaaaggagaaaattggtgattattggccaggattgc
gtggaacctcttcaggcacttagaagcactggagaagaggcctgccaagatctgaaagag
attgcagagaaaagaaagaacatggaaaacttgagaaggaagaggaaagaagagaaaaaa
cgtttgcatgatcaaaggcgaaagcagaggaagaagctaaaagggggaagttag
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