Coffea arabica (coffee): 113736272
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Entry
113736272 CDS
T11342
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113736272
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113736272
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
113736272
NCBI-ProteinID:
XP_027118966
UniProt:
A0A6P6WWA5
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Position
3e
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AA seq
452 aa
AA seq
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MASSPSAKKWVVSVCSIMLLAVVIVVGVVASVRKFEASNLSDAELEKLQSLHNSTMAARL
EEVEAALAEHAVDDPEEIASMVAMSIKNSTERRKLGFFSCGTGNPIDDCWRCDPNWQKNR
KRLADCGIGFGRNAIGGRDGRYYVVTDSSDDDPVNPRPGTLRHAVIQDQPLWIVFKRDMV
ITLKQELIMNSFKTIDARGVNVHIANRACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSP
SHYGWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVM
LLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASP
TINSQGNRYLAPLNPFAKEVTKRVETAEYQWKGWNWRSEGDLMLNGAYFTPSGAGASASY
ARASSLGAKSSSMVATMTSGAGVLDCRRGRTC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctccttctgcgaagaaatgggtggtttctgtttgctccataatgctgctt
gcggttgttatcgtcgttggagttgtagcttctgttcggaaatttgaagcttcaaacctg
agcgatgctgaactggagaagctgcagagcttacacaactcgacaatggcggcaaggttg
gaagaggtcgaggctgctttggctgagcacgcagttgatgaccctgaagagattgcttca
atggtggcaatgagcatcaagaacagcactgagaggagaaaacttggatttttctcatgt
ggaactggtaatcctattgatgactgctggcgctgtgatccgaattggcaaaagaaccgc
aagcgccttgctgattgcggaattggttttggacgcaatgccattggcggccgtgacggc
cggtattatgttgtgactgactctagtgatgatgaccctgttaacccccggcctggtacc
ctgcgccatgctgttatccaggatcagcccctttggattgtgtttaagcgtgatatggtc
atcacactgaagcaggaattaatcatgaacagctttaaaacaattgatgcccgtggagtg
aatgtccacattgctaatcgtgcgtgcatcacaatccaatttgttaccaatatcataatt
catggactgcacatccatgattgtaaacccactgggaatgccatggttagaagctctcca
tcacattatggctggaggacaatggctgatggtgatgccatctccatcttcggttcgagc
catatctgggtagatcacaattccctctctaactgtgctgatggccttgttgatgctgtc
atgggctcgactgctattaccatttccaacaactattttacccaccacaatgaggtaatg
ctcttgggtcacagcgattcctacgtgagagacaagcaaatgcaagtgacaattgcctac
aaccactttggagagggtctcattcagagaatgccaaggtgcagacacgggtacttccat
gtggttaacaatgactacactcattgggagatgtatgccataggtggaagtgctagtccc
acaattaatagccagggaaatcgttacctcgccccgctcaatccttttgcaaaggaggta
acaaagagggtcgaaactgctgaataccagtggaagggttggaactggagatcagagggc
gacctgatgcttaatggtgcctatttcactccatctggagcaggggcctcggccagctat
gccagagcttcaagtttaggtgccaagtcgtcttccatggtcgcaacaatgacttctggt
gctggtgtccttgattgccgcaggggccgcacttgttag
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