Coffea arabica (coffee): 113736411
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Entry
113736411 CDS
T11342
Name
(RefSeq) protein transport protein SEC23 E
KO
K14006
protein transport protein SEC23
Organism
carb Coffea arabica (coffee)
Pathway
carb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113736411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113736411
Membrane trafficking [BR:
carb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
113736411
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
113736411
NCBI-ProteinID:
XP_027119158
UniProt:
A0A6P6WUN3
LinkDB
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Position
3c
Genome browser
AA seq
784 aa
AA seq
DB search
MATEMAQMDPEGIDGVRMTWNVWPRTKVELSKCVIPLAASISPIRSHPDVLTLPYPPLKC
KTCTAVLNPFCRVDFQGLVWICPFCFSRNHFPQHYNAISETNMPAELYPQFTTIQYTLPT
LQPIHHHQNPNQNPNFFEPNSAVYLFVLDTCVLEEELEFAKSALKRAIGMLPDNALVGFI
SFGTQVQVHELGFSELSKVYVFRGSKDLTKDQVLEQLGLGVIGAARRPMPGIQRVGGSPV
GMPNPGFSRFLLPASECEYTLNSLLDELGTDRWLVPPGSRSLRCTGVALSVAAGLLGVCA
AGQSARIVALVGGPCTEGPGVIVSKDLSDPVRSHKDLDKDAAPFFKKAVHFYEELAKQLV
SEGHVLDVFASALDQVGVAEMKVAIEKTGGLVVLAESFGHSVFKDSFKRLFEGGEQSLGL
SYNGTLEINCSKDIKIQGVIGPCTSLEKKGPSVASTVVGEGNTTSWKLCGLDRNTCLTVF
FDISSSEKSDPSGSNPQLFLQFLTSYRSPEGQSLLRVTTVTKRWADSALGTEELVQGFDQ
ETAAVIVARFASYKMENEDGFDATRWLDRNLIRLCAKFGDYRKDDPSSFTLNPSFSLFPQ
FMFNLRRSQFVQVFNNSPDETAYFRMLLNRESISNSVVMIQPSLMAYSFHSLPTPALLDV
ASIAADRILLLDTYFSVVIFHGMTIAQWRNMGYQNQPEHQVFAQFLQAPQEDAQTIIRDR
FPTPRLVVCDQHGSQARFLLAKLNPSATYNNAHEMAAGTDIIFTDDVSLQVFFEHLQRLA
VQSS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagatggctcagatggatccagaaggaatcgacggagttcggatgacgtgg
aacgtctggccacggaccaaagtcgaattgagcaagtgcgtgatcccactcgcggcctcg
atctctccgatccgatctcatcccgacgtcctcaccctcccatacccgccgctcaagtgt
aaaacctgcaccgccgtcctcaacccattttgccgcgtcgatttccaaggtctagtttgg
atctgcccgttttgtttctctcggaatcattttccccagcattacaacgcaatttcggag
acgaatatgcccgccgagctctacccccaattcaccaccattcagtataccctccccacc
ctgcagccgattcatcaccatcaaaaccctaatcaaaaccctaactttttcgagccgaat
tcggctgtttatttgttcgttttggatacttgtgtcctcgaggaggaattggagtttgcg
aaatcggcgttgaaaagggctattgggatgttgcctgataatgctttggttgggtttata
tcgtttgggacgcaggtgcaggttcacgagctggggttttcggaattgtctaaggtgtat
gtttttagagggtctaaggatttgacgaaagatcaggttttggagcagttgggacttggt
gttattggggcagcacgacggccaatgcctggaattcagagagttggaggtagccctgta
ggaatgccgaatcccggtttttctagattcctgttgcctgcttctgagtgcgaatatacg
ctcaattcgctattggatgagttggggacggatcgatggctggtgccacctgggagcagg
tcgttacggtgtacaggagttgcattgagtgttgcagctggtttgcttggagtttgcgca
gctggtcaaagcgcaagaattgttgctttagttggtggaccatgtactgaagggccagga
gtgattgtttccaaggatctatcagatccagttcgttcacataaggatttagacaaggat
gctgcaccatttttcaaaaaagctgttcatttctatgaagagctagctaagcaacttgtc
agtgagggtcatgtcttggatgtttttgcatctgctcttgatcaggttggggttgctgag
atgaaggttgccattgaaaaaactggtggacttgttgttttagctgaaagttttggtcat
tcagtatttaaagactctttcaaacgactttttgaaggtggagaacagtctcttggtctt
tcctataatggcacactcgagataaactgttcaaaggacatcaaaatccaaggtgtcatt
ggaccttgcacatctttggagaagaaagggccttctgttgccagtacggttgttggagaa
gggaacactacatcttggaagttgtgtggcctcgataggaatacttgcttgactgttttc
tttgatatatcgtcaagtgaaaaatcagatccatcaggatcaaatcctcaattattccta
cagttccttacaagctaccggagccctgaaggccaatcgctgttgagagttacaactgtt
accaaaagatgggcggatagtgctcttggcacagaggagttggtccaagggtttgaccaa
gaaactgctgctgtcatagtggccagatttgcttcttataaaatggagaatgaggatggt
tttgatgccacacggtggttggatcggaatctgattcgtctttgtgccaaattcggtgac
taccggaaggatgacccgtcctcatttacattaaatccctctttttcattgtttcctcaa
ttcatgtttaatctgcggcgttcacaatttgtgcaggtatttaataacagtccagatgag
acggcatacttccgcatgttgctcaaccgggagagcataagcaactccgttgttatgatt
caaccatcactgatggcatattctttccattcattgcccacacctgctttgttggatgtg
gcatcaattgcagctgatcgtattctgttgttagatacatacttcagtgttgtaattttc
catgggatgacgatagctcagtggagaaacatgggctaccagaatcaaccagaacaccag
gtatttgcacaattcttgcaagctcctcaagaagatgcccagacaattattcgtgatcgg
ttccccacacccagattggtggtttgcgatcagcatgggtcacaggcaagattcctactg
gcaaagttgaacccgtcagctacgtacaataatgcgcatgagatggcagctggaacagac
ataatcttcaccgatgatgtgagtcttcaagtgttttttgagcatcttcagcggctggca
gtgcaatcttcttga
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