Coffea arabica (coffee): 113736652
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Entry
113736652 CDS
T11342
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
carb Coffea arabica (coffee)
Pathway
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113736652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113736652
Membrane trafficking [BR:
carb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113736652
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Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
113736652
NCBI-ProteinID:
XP_071938613
UniProt:
A0ABM4X3J5
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Position
3c:19974332..19983059
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AA seq
568 aa
AA seq
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MVLVNAVRDYINRILQDISGMKILILDSATVSIVSVAYSQSELLQKEVFLVEFVDSISMS
KEPMSHLKAVYFLRPTSENIQLMRRQLAKPRFGEYHLFFSNMLKDTQLHILADSDEHEIV
RQVQEFFADFVALDPFHFTLNIASNQMYMLPAVVDPSSLLHFCERVVDGIAALFLALKRR
PIIRYSRTSDISKRIAQEAAKLMYQQESGLFDFRRTEVTPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLRNTGKFPKDQQEVVLSSEQDAFFKANMYENFGDIGMNIKRMV
DDFQQIAKSNQNIQTVDDMAKFVDNYPQYRKMHGNVSKHVTLVTEMSKIVEERKLMLVSE
VEQELACNGGQGAAFEAVTNLLNNDSVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLAS
RSPKYKPGLVQFLLKQAGVDKRTGDLYGNRDLLNIARNMARGLKGVENVYTQHQPLLFHI
MESITKGRLRDVDYPFVGNHFQQGRLQEVVIFIVGGTTYEESRAVALQNTTNSGIRFILG
GSAVLNSKRFLKDLEEAQRIARTTTGLV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtgctagtaaatgccgtacgggattacatcaatcgaatccttcaagacatttccggg
atgaaaattctcatcctcgattctgctacggttagtattgtaagcgttgcatattctcag
tcagagcttcttcagaaagaagtttttttggttgaatttgtagattcaatatccatgtcc
aaagagccaatgtcacatctaaaagcagtttatttccttcgaccaacatcagagaatatt
cagcttatgcggcgtcaattggctaaacctcgatttggcgagtatcacctttttttctca
aacatgttgaaagatacccagctgcatatcttagctgattcagatgagcatgagattgtt
cgccaagtgcaggagttctttgctgactttgttgcgttagacccatttcacttcacgttg
aacattgcatccaaccaaatgtatatgctcccagcagttgttgatccttcaagtctgctg
cacttttgtgaacgagttgtcgatggaattgctgctttatttttggccttgaaacgaaga
cctattattcgttattcaagaacatctgacatttcaaaaagaatagcacaagaggcagcg
aagctgatgtaccagcaggaaagtggtctttttgattttagacgaacagaggttactcct
ttgttgttggtgattgataggagggatgacccagttactcccttgcttaatcaatggact
tatcaggcaatggtccatgagttgataggcattcaagacaacaaagtggacttgagaaac
actggcaaatttcccaaggatcaacaggaggttgtcttatcctctgaacaagatgccttt
ttcaaagccaatatgtatgaaaactttggagatattggaatgaatatcaaaaggatggtg
gatgatttccaacaaattgcaaagagcaaccagaacatccagactgtagatgatatggct
aaatttgttgacaattacccccaatacagaaaaatgcatggcaatgtttctaagcatgtg
acccttgttacggaaatgagcaagatagttgaagaaagaaaactcatgttagtttcagaa
gtagaacaggaattggcttgcaatggtggccaaggggctgcatttgaggctgtgacaaat
cttcttaacaatgacagtgtctctgacattgaccgcttacgtctagtcatgctgtatgct
ttgcgttatgaaaaggagagtcctgttcaactgatgcagttatttaacaaattggcatcc
cggtctcccaagtataagcctgggcttgtgcaatttttactaaagcaggctggagttgat
aaacgaactggggatctttatggaaaccgggatcttctaaatattgcacgcaacatggct
cgtgggctcaagggggttgagaatgtgtacacccaacatcagccgcttttatttcatata
atggagagcattaccaaggggcgactgagagatgtggattatccttttgttgggaatcac
tttcagcaagggaggttgcaggaagtggttatattcattgttggcgggacaacatatgaa
gaatcacgtgcagttgctttacaaaatactacaaactctggtattcgtttcattcttggg
ggttctgcagttctcaattctaagaggtttctgaaggaccttgaagaagctcagaggata
gctcggactaccactggtttggtttga
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