Coffea arabica (coffee): 113736911
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Entry
113736911 CDS
T11342
Name
(RefSeq) ion channel CASTOR isoform X1
KO
K21866
ion channel POLLUX/CASTOR
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carb02000
]
113736911
Transporters [BR:
carb02000
]
Other transporters
Pores ion channels [TC:
1
]
113736911
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Paralog
GFIT
Motif
Pfam:
Castor_Poll_mid
Slo-like_RCK
TrkA_C
Paratox
Motif
Other DBs
NCBI-GeneID:
113736911
NCBI-ProteinID:
XP_027119917
UniProt:
A0A6P6X256
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Position
3e
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AA seq
922 aa
AA seq
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MSLDRMDSSSDSPSTSFSNRDWFFPSQSFINSSHHIPRTSIRRFSSPYPKRAATPSFQSF
PASPPPPPWTPSISNSSPPPPPPPPPPANYYAKYAGVRRGSAYLSRQLRNQKSTSQNDGG
GIGGQGIKSKSDDAVSEFREDSKTTTEPAGKRLTGLFGGRLIVRWQTAFTAAVLVTAFSS
LVHKNFALHNEVIRLQDQIFKLNHRLLVCSLLDSIDDIDSTTHDINHLSNKSLKNIAVVA
SLALLSIPFLFLKYVDYVSNSRRLSDILTEKVSLNKQLAYRVDAFLSVHPYAKPLALLVA
TVLLICLGGLALFGVTDDSLADSLWLSWTYVADSGNHANSEGIGPRLVSVSISFGGMLVF
AMMLGLVSDAISEKFDSLRKGRSEVVGQNHTLILGWSDKLGSLLNQLAIANESLGGGMVV
VMAERDKEEMELDIAKMEFDFRGTSVLCRSGSPLILADLKKVSVSKARAIVILAEDGNAD
QSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQ
CARQPGLAQIWEDILGFENCEFYIKRWPQLDGMPFEEVLICFPDAIPCGVKAASYGGKII
LNPDDSYVLQEGDEVLVIAEDDDTYAPAALPTVQRGYLPKDFIVPKSAERILFCGWRRDM
EDMIMVLDAFLAPDSELWMLNEVPEKEREKKLIDGGLDSSRLVNITLVNREGNAVVRRHL
ESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPYREAMVSQVHRSSF
SQGSWIGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQIN
DVLEELFAEEGNEMQIRGAELYLREGEELSFYEVLLRARQRREIVIGYRVANTERAVINP
PAKNEKRKWSVNDVFVVIAEKE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggacagaatggactcctcatcggactccccgtcgacgtcgtttagcaaccgc
gactggttcttcccttcccaatccttcataaactcttcccaccatatcccaagaacatcc
atccgtagattctcctctccttatccaaaacgggctgcaacgccgtcgtttcagagcttt
ccggccagtcctccgccgccgccgtggactccttcaatatctaattcttctcctcctcct
cctcctcctcctcctccgccggctaactactacgccaagtatgccggtgtacgacgcggt
tctgcttaccttagtcgtcagttgcgaaatcagaagtcaacgagtcagaacgacggcggt
ggaattggtggtcaaggaattaagagcaagtccgacgacgccgtttctgagttcagggag
gatagtaaaacgacgacggagccggcgggtaagaggctgactggcttattcggtggccgg
ttgattgttcgttggcaaacggctttcaccgctgcagtattagtaacagcattttcgtcg
ttggtgcataaaaattttgcgttacacaatgaggttattcgtttacaggatcaaattttc
aagctcaatcaccggttactggtttgcagtttgcttgattctatagatgatattgattca
acgacacacgacataaaccatctttccaacaaaagcttgaaaaacatagctgtagtcgcc
tcactagcattgctatcaattccatttctttttctcaagtatgttgactatgtctcgaat
tcgagaagattgtctgacattctcacagagaaagtatctttaaacaagcagctggcatac
agggttgatgcttttttatctgttcatccctatgctaagccactcgccttgttagttgca
acagtactacttatttgtcttggcgggttagcactttttggggttacagatgacagctta
gcagattccctatggttatcttggacctatgttgcagactcaggcaatcatgctaattcc
gagggcattggtccgaggttagtgtcagtgtccattagctttggtgggatgctcgtattt
gcaatgatgctgggactcgtttcagatgcaatttctgagaagtttgactcactgagaaaa
ggaagaagtgaagttgtagggcaaaatcacactcttatccttgggtggagtgacaagttg
ggatctctattgaatcaacttgctatagccaatgagagtttgggtggtggaatggttgtg
gttatggctgaaagagacaaagaagagatggagcttgacattgctaaaatggaatttgat
tttagaggaacatctgttctatgcagaagtggaagccctttgattttagccgacctgaaa
aaggtatctgtctctaaggctcgtgcaattgtcattcttgccgaagatggaaatgccgac
cagagtgatgctcgtgccttgcggacagttctaagcttaacaggagtcaaagaaggacta
aggggacatatagtggtcgaactgagtgatcttgataatgaagtccttgttaaacttgta
ggtggagatctagttgaaacagttgtcgcacatgatgtaattgggcggctaatgattcaa
tgtgctcggcaaccaggccttgcgcagatatgggaagacattcttggctttgagaattgt
gagttctacatcaaaagatggcctcagttggatggaatgccctttgaggaagtcttgatt
tgcttccctgatgctattccttgtggtgtcaaggcagcatcgtatggtggaaaaataatt
ttgaatcctgacgactcctatgttttgcaagaaggagatgaagttcttgtgattgcagaa
gacgatgatacatatgctccagcagcactgcctacggttcagagaggatatctacccaag
gattttattgttccaaaatctgcagagcgcatacttttttgtggttggcgtcgagatatg
gaagatatgattatggtattggatgcctttttagcacctgattcagagttgtggatgctc
aatgaagttcccgaaaaggaaagggagaaaaagctcatagatggtggccttgatagcagc
agattggtcaatataacgctggttaaccgtgaaggaaatgctgttgttcgacgtcacctt
gaaagcctgccattagaatcttttgattctatcttaattttagctgatgaatcagttgaa
gattcagcaatccaggctgattccagatctcttgccacattgcttcttatccgtgatatt
caggcgaaacgccttccatacagggaagctatggtttcacaagttcacagaagtagcttc
tcacaaggttcctggattggggaaatgcagcaggcttcagataagtcggttataattagt
gaaatcctggaccccaggactaaaaacctcttatctatgtcaaaaatcagtgactatgtc
ttatcaaacgagcttgtcagcatggcactagcaatggttgcagaggatcggcaaataaat
gatgtactggaggagctttttgcggaagagggaaatgagatgcaaataagaggtgcggaa
ttgtatctccgggaaggggaggagctgagtttctatgaagtactacttcgagcacgtcaa
agaagagagatagtcattgggtatcgcgtggctaacacagagagagctgtaatcaatccc
ccagccaaaaatgagaagcgaaaatggtcagtaaatgatgtttttgtggtaattgctgag
aaagaatga
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