Coffea arabica (coffee): 113737032
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Entry
113737032 CDS
T11342
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113737032
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carb01007
]
113737032
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113737032
Enzymes [BR:
carb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
113737032
Amino acid related enzymes [BR:
carb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113737032
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113737032
Prokaryotic type
113737032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
113737032
NCBI-ProteinID:
XP_071939703
UniProt:
A0ABM4X6P5
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All DBs
Position
3e:complement(48560391..48584633)
Genome browser
AA seq
1006 aa
AA seq
DB search
MHAQFHSQFFPFCFLVDVSGQTKMAFYLSLSSSSSAAATSCCCAPPSSLYSRLNPLFFPQ
RRRNFTSTLSGLRRRRRSKTKFYTVAAAVSAENAGVFTSPETAKSFDFANEERIYKWWES
QGYFKPSFDRGSDPFVVPMPPPNVTGSLHMGHAMFVTLEDIMVRYHRMKGRPTLWLPGTD
HAGIATQLVVERMLASEGIQRVDLGREEFAKRIWDWKEKYGGTITNQIKRLGASCDWTRE
RFTLDAELSRAVVEAFVRLHEKGLIYQGSYLVNWSPNLQTAVSDLEVEYSQEPGALYYIK
YRVAGGSRDDYLTIATTRPETLFGDTAVAVNPEDERYSKYIGKMAIVPLTFGRHVPIISD
KYVDKDFGTGVLKISPGHDHNDYLLARKLGLPILNVMNKDATLNEVAGLYCGLDRFEARK
KLWSDLEETGLAVKKEAYNLRVPRSQRGGEIVEPLISKQWFVTMEPLAEKALKAVEKGEL
TIMPERFEKIYKHWLSNIKDWCISRQLWWGHRIPVWYIVGKDSEEEYIVARNGAEALEKA
QEKYGKHVEIYQDPDVLDTWFSSGLWPFSTLGWPDVSAEDFKRFYPTSILETGHDILFFW
VARMVMMGIEFTGTVPFTNVYLHGLIRDSQGRKMSKTLGNVIDPLDTIQEYGTDALRFTL
ALGTPGQDLNLSVERLASNKAFTNKLWNAGKFILQNLPSKSDLSSWEALSIYKFDMVESL
LKLPLAERWVVSKLHILIDTVTSSYDKYFFGDVGRELYDFFWADFADWYIEASKARLYHS
ESQSRASVAQSVLLYVFGNILKMLHPFMPFVTEELWQALPSREEALMASAWPLTSLPRHV
ESIKQFENLQALTRSIRNIRAEYSVEPAKRISASIVASSEVIEYISREKEVLALLCRLDL
QNMIFTDSAPGNANQSVHIVASEGLEAYLPLADMVDISSEVERLSKRLVKMQAEYDGLMA
RLSSPSFVEKAPEHIVRGVQEKAREAEEKLTLTRNQLAFLESSVLV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcccagtttcattctcagttttttcctttctgttttttggttgatgtttctggg
caaaccaaaatggcattctatctctcgttatcttcttcttcttcagctgctgctacttct
tgttgctgcgctccaccatcttctctgtacagcaggcttaaccctttattcttccctcaa
cgacgccgtaacttcacttccacactctccggactgagaagaagaagaagaagcaagact
aagttctacactgttgcagcagcggtatcagcagagaatgcgggcgtttttacttcacca
gagacggccaagtcatttgattttgctaatgaggagcgcatatacaagtggtgggagtct
caagggtacttcaagccgagttttgataggggtagtgatcctttcgtagttccaatgccg
cctcctaatgttactggttctttgcacatggggcatgctatgtttgtcactcttgaggat
attatggtaagataccatcgcatgaaaggaagacctacactttggcttcccgggactgat
catgctggtattgcaactcagttggttgtggagagaatgctggcatctgaaggaatacag
agggttgatttgggtagagaagagtttgcaaagcgaatctgggattggaaagagaagtat
ggtggaaccattacgaatcagattaagagacttggtgcttcgtgtgattggactagggaa
cgatttaccctggatgcagagctgagtcgagctgttgtggaggcttttgttaggctgcat
gaaaaaggcctaatttatcaaggttcatatttggtcaattggtctcctaatttgcagact
gctgtttctgacttggaagttgaatattctcaagaacctggtgctttatattacatcaag
taccgtgtagctggaggttcgagggatgattatttgacaattgcaaccacacgtccagag
accttatttggtgatacagctgttgctgtaaatcctgaggatgaacgttattctaagtac
atcggcaagatggctattgttccattgacgtttggacggcatgttcccatcatctcggac
aagtatgtggataaagactttggaactggtgtgttgaagataagccctgggcatgatcac
aacgactaccttcttgctcgaaaacttggtcttcccatacttaatgtgatgaacaaggac
gcaacactgaatgaagttgctgggctgtattgcggtctcgatcggtttgaggcacgaaag
aaactatggtcagatcttgaggagacaggcttggctgttaaaaaggaggcctacaatctg
cgagttcctagatcccaacgtggtggagaaatagttgagcctctcataagtaagcagtgg
tttgtaacaatggagcccttagctgagaaggctctcaaagcggttgaaaaaggagaattg
actattatgcctgagagatttgagaagatatacaagcattggctgtcaaatatcaaggat
tggtgtataagtcgacaactctggtggggacaccgaatccccgtctggtacatagttggt
aaggattctgaagaggaatatatagttgctaggaatggagcagaagcccttgaaaaagct
caagagaagtatggaaaacatgttgaaatatatcaggatcccgatgttcttgacacttgg
ttttcgagtgggctatggccattcagtactcttggttggccagatgtgtcggcggaagat
ttcaagcggttctatcctacatcaattcttgaaactgggcacgacatattgtttttctgg
gttgccagaatggtgatgatgggaattgagtttactgggactgttccatttacaaatgtg
tatctgcatggacttatccgtgactctcaaggtcgaaaaatgtcaaaaacattggggaat
gttattgatccactggatacaattcaagaatatgggactgatgccttacgcttcactcta
gcattaggaactcctggtcaggatctaaatttatcagttgagaggttggcctctaacaag
gcattcactaacaaattgtggaatgctggcaagtttatactgcaaaatttgccaagcaaa
agcgatttatcttcttgggaagcgttgtcaatttataagtttgatatggtggagtctctg
ctcaaactacctttggcagaacgttgggtggtatccaaacttcacattctcattgacaca
gttacatcaagttatgacaaatatttctttggagatgttggaagagaactatatgatttc
ttttgggctgattttgctgattggtacattgaagccagtaaagctcgcctttatcactct
gaaagtcagtcacgtgcttctgtagcacagtctgttctcttatatgtttttggaaacatt
ttaaagatgttacatccttttatgccatttgtcacggaagagctttggcaggcactacct
tcccgggaagaagctctcatggcatctgcttggccattgacttcacttccaaggcatgtt
gagtcaatcaagcaatttgaaaatttacaggctctgacaagatcaatcagaaatattcgg
gctgaatactctgttgagcccgcaaagcgaatatctgcatccattgttgcaagttcagaa
gtaattgaatatatatcaagagaaaaagaagttctagctcttctttgcaggttggacctg
caaaacatgatctttacggattctgctccagggaatgccaatcaatctgtacatatagtt
gccagtgagggtctggaggcataccttccacttgctgacatggtggatatatcttctgaa
gtcgagcgcctttccaagcgccttgtaaaaatgcaagctgaatatgatggactaatggct
cgtctaagttcacccagttttgtagagaaagctccagagcacattgttcgtggggttcaa
gaaaaagcaagagaagctgaagagaagttaacgctaactagaaatcagctagcttttctt
gaatcctcggtcttggtttaa
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