Coffea arabica (coffee): 113737172
Help
Entry
113737172 CDS
T11342
Name
(RefSeq) chalcone--flavanone isomerase-like
KO
K01859
chalcone isomerase [EC:
5.5.1.6
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00941
Flavonoid biosynthesis
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
Module
carb_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00941 Flavonoid biosynthesis
113737172
Enzymes [BR:
carb01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.6 chalcone isomerase
113737172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chalcone
Chalcone_2
Motif
Other DBs
NCBI-GeneID:
113737172
NCBI-ProteinID:
XP_027120236
UniProt:
A0A6P6WZX4
LinkDB
All DBs
Position
3e:complement(7062600..7063844)
Genome browser
AA seq
225 aa
AA seq
DB search
MILMAPAFSVSEVEVEGHVFPSSMKPSGSNGTFFLGGAGYRGLEIQGKFIKFSLPGVYLE
ETAIPSLAAKWKGKTAEELMESVEFFRDIITGPFEKFIRLTFLKPLTGEEFSKKVSEDCA
DYLKVIGSYTDAEDKAIEKFHDIFKNESFQPGDSILYSQSPLGSLRISFSKHDSIPEVSG
GVVENKPLSETVLESIIGRDGVSPSTRKSLAVRVSDLLKVSDTAS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgatactaatggcgccggcattctccgttagcgaagttgaagttgagggccacgtgttc
ccttcatccatgaagccttctggctccaacggtaccttttttcttggaggcgcggggtat
agaggattggaaattcaaggcaagtttatcaagttctcacttcctggagtgtatttggag
gagactgcaattccgtcactcgccgccaagtggaagggcaagactgctgaggagttgatg
gaatctgttgagttcttcagggacatcattacaggtccctttgagaagttcattaggttg
acatttttgaagcccttgacgggtgaggaattctcgaaaaaagtaagtgaagattgtgcc
gactacttgaaagtaattggaagttacactgatgcagaggataaagctattgaaaagttc
catgatattttcaagaacgagtccttccaacctggtgactccatcctgtactcccaatca
ccccttggatcactaagaattagcttctccaagcatgattccatacccgaggttagcggt
ggagttgtggagaacaaaccactatctgaaacagtgctggaatccattattggcagggat
ggtgtttcaccttctacaaggaagagtctggcagtacgagtatcagacttgttgaaagtg
tctgacactgcatcatag
DBGET
integrated database retrieval system
