Coffea arabica (coffee): 113737496
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Entry
113737496 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113737496
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
113737496
TFIIIC, fungi type
113737496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_8
TPR_2
TPR_1
TPR_14
TPR_17
TPR_11
TPR_9
TPR_16
TPR_12
TPR_CcmH_CycH
ANAPC3
NatA_aux_su
TPR-S
ARM_TT21_5th
TPR_15
HAT_PRP39_C
BLOC1S3
Motif
Other DBs
NCBI-GeneID:
113737496
NCBI-ProteinID:
XP_027120524
UniProt:
A0A6P6WYL7
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Position
3e:26578211..26584837
Genome browser
AA seq
945 aa
AA seq
DB search
MEEGEGAGVVGSSSEFHADEHPMELESQLEEEHEVDDEGEGTTANTMANIEGEEEDDDDE
DEEEEGYKFRFSDDMDPLAFTKEDASGLQPYEQFQRLEHHYEALAAKKRKARLQAIPQGE
VPADKKPRQLQEDVSGATMEEIMELMNYGSRRRSRKSKRRGRRKGSRNKVSPEVTRKLGD
ATLHYAHGHYGEAIGMFYEVIRLSPNLPDPYHRLGLIYNEMGDKKRALDFYMIAAHLTPK
DASLWKLLVTWSIEQGDTGQARYCLFKAITADPEDINLRFHRASLYVELGDYLKAADSYE
QISQLCPDNVKVLQTAAQLYKKCGQSERAVTVLESYLRNCCKEPDLNVVDILASLHMEGN
AHCKALEHIEHAQQVYCSGKEMPLCLRTKAGICHIHLGNLVKAEALFNVLRHENLHDHPQ
LIIQIGDSLMNHGHYESAVEYYMMLVGDDVKNNGCLYLKIAECCCCLGKRLQSIDYFYRA
LDKLENSVDTRLALSSLLLEENKDDEAISVLCPPKESESLFNLNLNAAKPWWLNGKIKLK
LSQIYKAKGLLEAFVDVFFPVVRETLFLETIQQKVRPRKKLSKSVLSERIKILDHVRTDT
VFHGFRPVASASDLSRASRAKKLLKKKEAKRAAALAAGIEWISDDSEDESPQQAPRELPL
PNLIRDAEHHHLIIELCKSLASLKKYWEALEIINLTLKLASNVLSVERNEELRTLGAQIA
YTIADPAHGFEYARYIVNQRPYSFSAWNCYYKVMSKLDSRYSKHNKFLHTMRTKHKSCVP
LTLIFGHQFTMISQHQAAVREYLEAYKLMPDIPLVNLCAGTALINLALGHRLQNKHQSVA
QGLAFLYNNLQLCRYSQEALYNIARAYHHVGLVSLAALNYEKVLTMHESDCPMPNLPNEK
PDGLASPKSGYCDLRREAAYNLHLIYKKSGAIDLARQILKDHCVI
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggcgagggtgctggggttgtaggtagcagcagtgagttccatgcagatgag
catcctatggaattggaatcacaattggaagaagaacatgaagtcgatgatgaaggagaa
ggcactactgctaacactatggctaatattgaaggagaagaagaagatgatgatgatgag
gatgaagaggaagaagggtataaattcaggttcagtgatgacatggatcctctggctttt
accaaagaggatgcatctgggctccagccttacgagcaattccagcgcctggagcaccac
tatgaagctttggctgccaaaaagcgcaaggcccgtctccaagccataccccaaggggaa
gtacctgcagataaaaaaccacggcaactacaagaggatgtttctggtgcaaccatggaa
gaaataatggaactcatgaattatggctctagaagaagatccaggaagtccaagagaaga
ggtcgacgaaagggatcaaggaataaagtcagtcctgaagtgactcgaaaacttggtgat
gctactcttcattatgcccatggccactatggagaggccatagggatgttttatgaagtg
attcgtctttctcccaatcttcctgatccatatcataggcttgggctcatctataatgag
atgggtgataagaagagagccttggatttctacatgattgctgcccatttaaccccaaag
gatgcatctctgtggaagcttcttgtgacatggtccatagaacaaggtgatacaggacaa
gccaggtactgcctttttaaagcaataacagcagatcctgaagatatcaatttgcggttt
caccgtgcatctctttatgttgagttgggtgattatttgaaagctgctgattcatatgag
caaatttcacagctctgtcccgacaatgtaaaggtactacagactgcggcccagctgtat
aaaaaatgtggccaatctgagcgtgcagtcactgtactggaaagctatctcagaaattgt
tgcaaggaacctgatttaaatgtggttgatatattggcttcactacacatggaaggcaat
gcacattgtaaagccctcgagcatattgagcatgcacagcaggtttactgctctgggaaa
gagatgccattatgtctacgtacaaaagctggaatatgtcatattcaccttggaaacttg
gtaaaagcagaagctcttttcaatgttttgagacatgagaatttacatgatcatccccag
ttgattattcagattggagattcactaatgaatcacgggcattatgaatctgcagtagaa
tactatatgatgttggtaggagatgatgttaagaacaatggttgcctgtatctgaaaatt
gctgagtgttgctgttgtctggggaaacgattgcaatcaattgattacttctacagagct
ttagacaaacttgagaatagtgttgatactcggctggctttgtcatcacttcttcttgaa
gaaaataaagatgatgaagccatttctgttctatgtcctcctaaagaatcagaatcacta
tttaacttgaacctaaatgcagcaaaaccatggtggcttaatgggaagataaagttgaag
ctttctcaaatctataaagctaaaggattgttagaggcatttgtagatgttttttttcct
gtggttcgcgagacattgtttcttgagactatacaacaaaaggtcaggccaaggaagaag
ctatcaaaaagtgttctttctgaacggataaaaatacttgatcatgttaggactgatact
gtgtttcatggatttagacctgtagcttcagcatcagatctgtctagagcgtccagagca
aaaaagttactaaaaaagaaggaagcaaaaagagctgctgctttggctgctggaattgag
tggataagtgatgattcagaggatgaatctccccaacaagcgccaagagagcttcctctt
ccaaaccttataagagatgcagaacatcatcatctcattatagaattatgcaaatcacta
gcatccttgaaaaagtattgggaagcattggaaatcatcaatttaactctgaaattggcc
tccaatgttttgtctgttgaaaggaacgaagagcttagaactctgggagcccaaatagca
tacactattgctgatcctgctcacggctttgaatatgcacgctatattgttaatcaacgt
ccttatagcttttctgcatggaactgctattacaaagtaatgtcaaaactggacagtcga
tattcaaagcataacaagtttttgcacaccatgcgaaccaagcacaaaagttgtgtacca
ctcactctcattttcgggcaccagtttaccatgatcagccagcatcaagcagctgttcgg
gaatatttggaagcttacaagctgatgccagatattcccttggtcaatctttgtgctgga
actgcattgataaacttggccctaggtcacagacttcaaaacaaacatcagtctgtggcc
caaggattggcatttctttacaataatttacagctttgcagatatagtcaggaagcactg
tataatatagctcgagcatatcatcatgtcggtcttgtttctcttgctgctttaaactat
gaaaaggttcttacaatgcatgaaagtgattgccccatgccgaaccttccaaatgagaaa
ccagatggtctggcttctccaaagtcaggctactgtgatcttcgtcgggaagcagcttac
aacttgcatctgatctacaagaaaagtggagcaattgatcttgccaggcaaatcttgaaa
gatcattgtgtcatatga
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