Coffea arabica (coffee): 113737798
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Entry
113737798 CDS
T11342
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal isoform X2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00061
Fatty acid biosynthesis
carb00071
Fatty acid degradation
carb01100
Metabolic pathways
carb01212
Fatty acid metabolism
carb04146
Peroxisome
Module
carb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
113737798
00071 Fatty acid degradation
113737798
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113737798
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
carb01004
]
113737798
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
113737798
Enzymes [BR:
carb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
113737798
Lipid biosynthesis proteins [BR:
carb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
113737798
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of breast milk
113737798
Exosomal proteins of breast cancer cells
113737798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
113737798
NCBI-ProteinID:
XP_027120770
UniProt:
A0A6P6WZL3
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All DBs
Position
3e:2893367..2901652
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AA seq
696 aa
AA seq
DB search
MEAAAERRIKALQSHLNPSNCDEPSVLHPNPTSGEFVSEQGYSVVLPEKLQTGKWNVYRS
ARSPLKLISRFADKPEIATLHDNLVQSAKSFSDHKYLGTRVRDDGTVGEYRWITYGEAST
ARSAIGSGLVSRGLQKGSCVGLYFINRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIV
NHASIQTIFCMPQTLDTLLRFLSEIPSVRLIVVVGGVDNRIPTLPSTTAVEVVSYSKLLS
QGLASLHPFCPPNPDDIATIMYTSGTTGTPKGVVLTHANLIANAAGATYGAVLYPSDVYI
SYLPLAHIYERANQILVVYYGGASGFYQGDHLKLLEDMAVLKPTIFCSVPRLYNKIYAGI
MNAVKSSGVLRQRLFYAAYNAKKQAIFSGKKSPPMWDRLVFNRIKAMLGGRVRSMVSGAS
PLSPDVMDFLRVCFGCQVVEGYGMTETSCVLTIMDEQDILSGHVGAPNAACEIKLVDVPE
MNYTTEDQPYPRGEICVRGPIVFRGYYKDEAQTRETIDEDGWLHTGDIGLWLPGGRLRII
DRKKNIFKLAQGEYIAPEKIENVYATSKFVAQIFVYGDSLNSALVAIVSVEQEMLKAWAA
AQGIKCDDLQQLCTDQRARSAVLADMDAVGRAAQLRGFEFAKAVTLVLEPFTLENGLLTP
TFKIKRPQAKAYFAKAIADMYAELSASDSSSQKMKL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagcggctgaacgtcgcattaaagctctgcaaagccatctgaatccgtccaac
tgcgatgaaccttcagtactccatccaaatcccacctccggcgagtttgtttctgagcag
gggtatagtgttgtgcttccagagaaactgcagacagggaagtggaacgtgtacagatca
gctcgttctccacttaagctcatcagcagatttgctgataaaccagaaattgctactttg
catgataatttagtgcagtcagccaagtctttttcagatcacaagtatcttgggacacga
gttcgggatgatggaacggttggagagtataggtggattacatatggggaggcaagtact
gcaaggtcagcaattggttcaggcctagtgtcacgtggattacaaaagggttcctgtgta
gggctgtattttatcaacaggccagagtggctaattgttgatcatgcctgctctgcttat
tctttcatttcggttcctttatatgataccctaggtccagatgcagtcaaatatatcgta
aatcatgcatctatacaaaccatattttgtatgccacaaacacttgatactttactcagg
ttcttatcagagattccgtcagttcgactaattgtggtggtcggtggtgttgataatcga
ataccaacattaccatcaacaactgcagtagaggtcgtgtcatattcaaagttacttagc
cagggccttgccagtcttcatcctttttgtccgcctaaccctgatgacatcgctacaatc
atgtatacaagtggtacgacaggtacaccaaagggtgttgtattgacccatgcaaacttg
attgcgaatgctgctggtgcaacctatggtgctgtcttatatccttcagatgtttacata
tcatatcttcctctggcacacatatacgaacgggctaaccaaattctagtagtatattat
gggggagcgtcgggcttctatcaaggagaccatttaaagttgctggaggatatggctgtc
cttaaacccactattttttgcagtgttcctcggctatacaataaaatatatgcaggcatc
atgaatgcggtaaagtcgtctggtgtcttgaggcagaggctattttatgctgcatacaat
gctaaaaagcaagcaatattcagcgggaaaaagtcacccccaatgtgggacaggttagta
ttcaacagaataaaggcaatgctgggaggtagggttcgttccatggtttcaggggcctca
cccttgtctccagatgtcatggactttttgcgggtgtgcttcggttgtcaggtagtagaa
ggatacggaatgactgagacttcttgtgttttaaccattatggatgagcaggatatcctg
tctgggcatgttggcgcccctaatgctgcatgtgaaataaagcttgtagatgttccagaa
atgaactatacaactgaggatcagccatatccacgtggtgaaatctgcgtaaggggcccg
attgtgttccgaggctattataaagatgaagcgcagacaagagaaaccatcgacgaagat
ggttggcttcacacaggagatattggattatggctacctgggggtcggttgaggataatt
gataggaagaagaacatattcaagttggcacaaggagaatacatagctcctgagaaaatt
gagaatgtgtatgcaacaagcaagtttgttgcgcagattttcgtgtatggtgacagcctg
aactcggctttggttgcaatagtctcagtagagcaggaaatgttgaaagcatgggcggca
gctcaaggcatcaagtgtgacgacctacaacagctttgtactgatcaaagagcgaggtct
gcagtcctggctgatatggatgctgtgggaagggcagctcagctgagaggttttgagttt
gcaaaagctgtgactttggtacttgaaccattcactctagagaatggtctgctcacgccc
acattcaagatcaagagaccacaggcaaaagcatactttgcgaaagcaatagctgacatg
tatgctgaactttcagcttctgattcctcttcccagaagatgaaattgtga
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