Coffea arabica (coffee): 113737799
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Entry
113737799 CDS
T11342
Name
(RefSeq) transcription factor FAMA-like isoform X2
KO
K26213
transcription factor FAMA
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113737799
Transcription factors [BR:
carb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
113737799
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
bHLH_IRO3
ACT_ACR_D1
bHLH_SAC51
ACT_4
Motif
Other DBs
NCBI-GeneID:
113737799
NCBI-ProteinID:
XP_027120772
UniProt:
A0A6P6X4K2
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Position
3c:7123020..7125404
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AA seq
406 aa
AA seq
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MEKEENYSGSIPGNFTGLDYTLEHQHQQLMKPQIGEVSGDDGSNQMVDYMLHNTTQQQPM
SSGFCASTSLDKLSFADVMQFADFGPKLALNQAKTPEEETVLNDSVYFLKFPVLNEKLQD
DPDHQALMFPRPINEESNSKVGEEGDQRPDQDQARGFGNTSVQLQFLGDNREKSPLTTET
KNKRKRPRTIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIG
GAIEFVRELEQLLQCLESQKRRRLYGDGPRPIGDSSSSVPIQQPQPPFFPGMPLSSDQMK
LVELETGLHEETAESKSCLADVEVKLLGFDALIKILSRRRPGQLIKTIAALEDLQLNILH
TNITTIEQTVLYSFNVKVASEARFTAEDIANSIQQIFSFIHANSSI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaagaaaactactcaggttccattcctggaaatttcacaggacttgactac
acactagaacatcagcatcaacagctgatgaagccacagattggagaagtatcgggtgac
gatggcagtaatcagatggtggattacatgctccataacactactcagcaacagcctatg
tcttctggcttttgtgcttcaacttctttagataagttgagctttgctgatgtgatgcaa
tttgccgattttggtccaaagttagccttgaatcaagcaaaaactccagaggaggaaact
gtcttgaatgattcagtttacttccttaaatttccggtcttgaatgagaagttgcaggat
gaccctgatcatcaagcccttatgtttcctcgacctatcaatgaagaaagcaactctaaa
gtaggggaagaaggtgatcaaagacctgatcaagatcaagcccggggtttcggaaacaca
tcagttcaactgcaatttcttggtgataaccgagaaaagagtcctttaacaacagaaacg
aagaacaagagaaaaagaccgagaactatcaagacgagtgaagaagttgagagccagcgg
atgactcacatagcagtagaaagaaaccgtaggaagcaaatgaatgaacatcttcgagtt
cttaggtctctcatgcctggctcatacgtgcaaaggggagatcaagcatcaataattggc
ggggcgattgagttcgtaagagaattggagcaacttcttcaatgtctagaatcacaaaaa
aggaggaggctatatggagatggtccaagaccaataggagattcatcatcatcagttcca
attcagcaacctcaacccccattttttcctggcatgcctctttctagtgatcaaatgaag
cttgttgaattggaaactggactacatgaagaaacagctgagagcaagtcatgcttggct
gatgttgaggtgaagctcttagggtttgatgcattgatcaagatattgtctagaagaaga
cctggacagcttattaagaccattgctgcccttgaggatttgcagctcaatattcttcat
accaacataaccacaattgaacagactgttctatattctttcaatgtcaaggtagcaagc
gaagcaaggttcacagctgaagatatagcaaattccattcaacaaattttcagttttatc
cacgcaaacagcagcatatga
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