Coffea arabica (coffee): 113737871
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Entry
113737871 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K11797
PH-interacting protein
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113737871
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113737871
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
113737871
NCBI-ProteinID:
XP_071906255
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Position
5c:47949731..47966498
Genome browser
AA seq
1744 aa
AA seq
DB search
MALQKYVPGGDAPLVIKKSLSFSSKANVKAQSGDSQTRTTEADVDVDFREIYFLIMHFLS
AGPCQRTCGQLWNELLEHQLLPRRYHAWYSRNGAHSGDADDDGLSFPLSYIKLVERYPHV
EKDHLVKLLKQLILNAASPAHGVVDRNAINAAAVPTLLGTSCFSLLSSEQNKANDEVNHP
PSYMRWPHMLADQVHGLSLREIGGGFSRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVRG
HRYAVYCAIFDRSGRFVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVNFNNSVIA
SASNDCIIRVWRLNDGCPISVLRGHTGAVTAIAFSPRPGAFFQLLSSSDDGTCRIWDARC
PNPKSTRVYVPKPSDPAPGKNNGPSSSSAQQSHQIFCCAFNSSGTVFVTGSSDTLARVWN
ACKGNAEESGLPNHEMDVLAGHENDVNYVQFSGCAVTSRFSVSDTSKEENIPKFKNTWYN
QDNIVTCSRDGSAIIWIPRSRRSHGKIGRWTRAYHLKVPPPPMPPQPPRGGPRQRVLPTP
RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS
AGYDGKTIVWDIWEGTPVRTYEIGRFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQ
MDAKYDQFFLGDYRPLIQDTHGNVLDQETQLLPYRRNMQDLLCDSALLPYPEPYQSMYQQ
RRHGILGIEWRPSSVKFAVGADISLDQDYQMLPIADLDVLIDPLPEFLDVRDWEPEIEIQ
SDDTDSEYHITEEISSGGEQGSLISVSSGDLESSGDDSEAEDSHKDGLRRSKRKKQKAEI
EVTTSSGRRVKRKNLDEYGDSSLVISRSRKSKLGRKVSRKRSSLSKSLRPQRAAARNALH
LFSRITGTSADLEEEYTTEGDSSGTETILDDSSIVSEDSDLSLQNEGGENLKGKQISVDQ
SEDLDKRDLRSKLNLDAGAKRRLVLKLPNRDASKFLTPKYGVPESESQRVCAGPSSTAPT
PADEGKSFTHDHKYPVSDGHGSEMDKSHTGQPAKIQHCLDLLEGCKESNIGWGGVKTRTS
KRSRVGESMSSVAHAGSIPFLDGHDKTEKPGGKADEMIEINKDEVSASILNNSEARNIDS
NSCLIDSKDIEKSSSKQVIDGRTGLSIQLTNGKDDSFKLLEKPVTMPTKLRIKSRIFISD
HESSGKIEGQSSFEGSGHNSCCMSESSDIRKNSSCGPLVNEETRLPNSENGIHDQVGRSS
NSVLLDLHQLPPQNRIFSAVYRRSKSLRGRSNQEHDNGNGASTSAGEDHNLHDENEALTE
GVRRPRSIRLRSSAADDLSTDDGNLLQIEGVRKARSIRLRSTARDSNFSGSKSKIKEAHG
ASSNTPPFAENSSVNRDDNSYEEQGMGAKVPVMGLRPTRNRRSSYYDREASPPDKRKPIQ
STRSSWLLLSTHEEGFRYIPQQGDDVVYLRQGHQEYIAYSHLKDLGPWSTLKGHIRAVEF
CKVEELEYSTIGGSGESCCKILLKFVDLESSVVGKSFRLVLPEVTSFPDFLVERSRYDAA
ISRKWTSRDKCQVWWKNEGEEDGSWWEGRILAVKPKSPDFPDSPWESYVVQYKSDPRETH
QHSPWELYDADTHWEQPHIDVDIRDKLLTAFAKLERSVIKNRDYYGVQKLREVSQKASFI
NRFPVPLSLEVIQSRLENNYYRSLDAMKHDVKVLLSNAESYFGRNADGLAKVRRLSDWFT
RILC
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcagaaatacgtcccaggtggtgatgcgcctttggtgattaagaagtcattg
agtttttccagcaaagcaaatgtaaaagctcaatctggagattcacaaacacgaacaaca
gaagctgatgtagatgttgacttcagggagatctattttttgatcatgcattttctatca
gctggaccttgtcagaggacttgtgggcagctctggaatgaacttcttgagcaccaactt
ttacctagaagatatcatgcatggtattctaggaatggagcgcatagtggagatgcagat
gatgatggattgtctttccctttgagttatattaagttggtggaaaggtaccctcacgtt
gaaaaggaccatttggttaagcttttgaagcaactaatcctcaatgctgcatctcctgct
catggggtggttgacagaaatgctataaacgcagctgctgtccctactctcttgggaacc
agttgcttttcacttctgagcagtgaacaaaataaggcaaatgatgaagtaaatcatccc
ccaagttacatgcgttggcctcacatgttggctgatcaagttcatggactaagtctaagg
gaaattggtggtggtttttccagacaccaccgtgcaccctctattcgtgcagcttgttat
gcgattgcaaaaccatccaccatggtgcagaagatgcaaaatattaaaagagttagagga
caccgttatgctgtttattgcgccatttttgaccggtctgggagatttgtcattactggc
tcagatgatcgacttgttaaaatttggtcaatggaaactgcatattgcttggccagctgc
cgaggacatgaaggtgacatcactgacctcgctgtgaacttcaacaacagtgtgatagct
tctgcgtcaaatgattgcatcatacgtgtttggaggttgaatgatggctgtccaatatca
gttttgagaggtcataccggagctgttactgctattgcctttagtccaagacctggcgcc
ttctttcagcttttatcgtcctctgatgatggaacgtgtcgtatttgggatgctagatgc
ccaaaccccaaaagtactcgtgtatatgtgccaaaaccttcagatcctgctcctggaaag
aacaatggtccttcatcaagcagtgcccaacaaagccatcagatcttctgttgtgctttc
aactctagtggaactgtttttgttactggaagctcagacactcttgcaagggtttggaat
gcttgcaagggcaatgcagaggagtcaggactacctaatcatgagatggatgttttagct
ggacatgagaatgatgtaaactatgtccaatttagtggctgtgctgtgacatctagattt
tcagtctctgatacttcaaaagaagaaaacatcccaaaattcaaaaacacttggtataac
caggacaacatcgtcacctgctctcgcgatggcagtgctatcatatggattccaagatct
cgtagatcacatggtaaaattggccgatggacacgggcatatcatcttaaagttccgcca
ccacctatgccacctcaaccaccgaggggaggtcctcgtcaaagagttcttccaactcct
cgtggtgttaatatgatagtctggagtttggacaatcggtttgtcctcgctgctatcatg
gattgcagaatatgtgtctggaatgctgctgacggtagcttagtacattctttgacaggc
cacactgaatcaacttatgttttagatgttcatccttttaaccctcgaatagcaatgagt
gcgggatatgatgggaaaacgattgtctgggatatatgggaaggcacacctgttcgtact
tatgaaattggacgctttaagctggttgatggaaaattttctccggatggaacatcaatt
attctctctgatgatgttggccaactgtatatacttagcactgggcagggagaatcccaa
atggatgccaaatatgatcagttcttcttaggggactatcgaccacttattcaagataca
catggaaatgttcttgaccaggaaactcagcttttaccttaccgaaggaatatgcaagat
cttctttgtgattcagccttgcttccgtatcctgagccttatcagagcatgtaccaacaa
cggcggcatggaatcttgggcattgaatggcgcccttcttctgtaaaatttgctgttgga
gctgatatcagcctggaccaagattaccaaatgcttcccatagcagacttggacgttttg
attgatccacttccagagtttctagatgttagggattgggaaccagaaattgagatacaa
agtgatgatactgattcagagtatcatataactgaggaaatctcttctggaggggaacaa
ggaagcttaatttctgtttcttctggtgacctagagagtagtggagatgacagtgaggct
gaggattcccataaagatggccttcgaaggtcaaaaaggaaaaaacagaaggccgaaatt
gaggtcactacatcttctggaagacgtgttaagaggaagaatctggatgaatatggtgat
agttcccttgtaattagtcgtagtagaaaatcaaaacttggtcgtaaagtctcaaggaaa
aggtcatcgttatctaagtctttacgacctcagagagctgctgccaggaatgctcttcat
ttattctcccgaattacaggaacatcagcagatttagaagaagaatataccactgaaggt
gattcatcaggaactgaaaccatacttgatgattcaagcattgtcagtgaagactcggat
ttatctttgcaaaatgaaggaggagagaacttgaaaggaaaacaaatttctgtcgatcag
tctgaggatttggataaacgtgatctccggtcaaagcttaatctagatgctggagctaag
agaagattagtgttaaaattgccaaaccgtgatgcaagtaaatttttaactccaaaatat
ggtgtccctgaatctgaaagccagcgtgtttgtgcaggcccatcatctacagctcctaca
cctgcagatgaggggaaaagttttacacacgatcacaagtaccctgttagtgatggacat
ggcagtgaaatggataaaagccatacaggccaacctgcaaagattcaacattgtttagac
ttgcttgaagggtgcaaagaaagcaatattggttggggaggggtaaagactcgcacttct
aaacgttcaagggtgggtgaatcaatgtcttcagttgcacatgctggatctattccattt
cttgatggacacgacaagacagaaaaacccggaggtaaggctgatgaaatgattgaaata
aacaaggatgaagttagtgccagcattcttaataattctgaagctaggaatatcgattca
aattcatgtttgattgactcaaaggacattgaaaaatcatcatctaagcaggtgattgat
ggtagaactggactttccattcaacttactaatgggaaagatgacagttttaaattgcta
gagaaacctgtcacaatgccaacaaagctgcgcattaagtcaagaatctttattagtgat
catgaaagctctggaaagatagagggtcaatcatcatttgagggttctgggcacaattcc
tgttgcatgtctgaaagttcagacattaggaagaactcaagttgtggccctcttgtcaat
gaagagaccagactacctaattcagaaaatggaatccatgatcaggttggtaggtcttcc
aattctgtgttgctggacttgcatcagttgcctcctcaaaataggattttcagtgctgtt
tatcgaaggtcaaagtctctgaggggtagaagtaatcaagaacatgacaacggaaatgga
gccagtacttcagctggagaagatcataatttacatgatgaaaatgaagcactgactgaa
ggtgtcaggaggccaaggtccattagattgaggtcatcagctgcagatgatcttagcaca
gatgacggaaatcttttgcaaattgaaggggtaagaaaggcaaggtccatcagattgagg
tcaactgctcgtgattcaaacttttcaggcagcaagagtaaaattaaggaagcccatggt
gcttcatcaaatactccaccttttgcagaaaattcttcagtgaatcgagatgataactct
tatgaagaacaaggaatgggtgcaaaggttcctgttatgggattaagaccgaccagaaac
agaagaagtagttattatgatcgtgaagctagtccaccagataaaaggaaaccaattcaa
tcaacaagaagttcatggttattattgtcaacacatgaggagggcttccggtatattccc
cagcaaggggatgatgttgtgtatttgagacaggggcaccaagagtacatagcttacagc
catttaaaggatttgggcccttggagtacactcaaaggccacatcagagctgtggagttt
tgcaaggttgaagagctcgagtactcaacaattggtggttctggcgagagctgctgtaaa
atattacttaaatttgtagatctggaatctagtgtagttggtaaatcgtttagactggtt
ttgcctgaagtgactagcttccctgactttcttgttgagagaagtcgatatgatgctgcc
atttcgagaaagtggacttctcgggataaatgccaagtttggtggaaaaatgagggtgag
gaagatggtagttggtgggaaggccggattttggctgtaaaacctaaatctcctgacttt
ccagacagtccatgggaaagttatgtggttcagtacaaaagtgatcccagggaaacacat
caacatagtccttgggagctgtatgatgctgatacacattgggagcagcctcatattgat
gtagatattagagacaagctgctcactgcttttgccaagctggagcgatctgtgattaag
aatcgggactactatggggtgcaaaaattgagagaagtttctcaaaaagccagttttatt
aacaggttcccagttccgttgtctcttgaagtgatccagagtagattagagaacaactat
tatagaagtttagatgcaatgaagcatgatgttaaagtactgctgtcaaatgccgagtcc
tatttcggaagaaatgctgatggtttagcaaaagttagacgtttgtctgactggttcaca
cggatactgtgctga
DBGET
integrated database retrieval system
