Coffea arabica (coffee): 113738072
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Entry
113738072 CDS
T11342
Name
(RefSeq) pumilio homolog 24
KO
K14844
pumilio homology domain family member 6
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113738072
03009 Ribosome biogenesis [BR:
carb03009
]
113738072
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
113738072
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113738072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113738072
NCBI-ProteinID:
XP_027121035
UniProt:
A0A6P6X0A0
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Position
3e:1050781..1059003
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AA seq
653 aa
AA seq
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MAAKPLKSNDSKKRKRIAGPKGEERKANPKRLKSPSTNNSQSGSKKPFKASKQPPSRQYG
AKPPTQKHVPDTKKQRRLLAKELAEARKKKRKKHYTLEQELSILWEKMRRRDIAKEDRSK
LASEALGKMKGKIPEIASSHVSSRVLQTCVKYCSQEEKSAVFMELQPHFISLATNTYAVH
LVTKMLDNASKDQLSEFISSLYGHVAPLLRHMVGSLVIEHAYDVGNASQKQTLLMELYSP
ELQLFKDLVSMKETRLVDVISKLQLQRSSVVRHMSSVLQPILEKGILDHSIIHRTLMEYL
TVADQSSAADVIQQLSGPLLVRMIHTRDGSRVGILCIKHGSAKERKKIIKGMKGQCDKIA
RDRFGSMVLVSILSTVDDTKLLSKIIVRELEGILKELVLDQNGRRSLLQLLHPNCSRYLS
PDDLMSLSLSIPSLNTKQKESSEVNEASDEEKRDNGEILVEANTGKSAGKNSDVNEVAKK
DPLTRRRELLINSGLAEKLIDVCSEMAENLLRSKFGKEVIYEVVTGGADGVLHPAMDEKL
EKLYEVIATLVAEPKSEGAEDDHLLEDFHSSRTIRKLILDCPIFASKLWEKALKGKCAIW
AQGHSCKVITAYLEASDLALREAAKKELQPLIDSGVLTLPAVNESAKADQDFH
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaagcccctaaaaagcaacgattcaaagaagagaaagagaattgctggaccc
aaaggagaggaaagaaaagccaatcccaagagattgaaatcaccttctaccaataattct
cagtcggggtccaagaaaccattcaaagcatccaaacaaccaccatctaggcagtatgga
gctaagcctccgacacagaagcacgtaccagataccaaaaaacaacgtcgtttgctagca
aaggaattggctgaagcaagaaagaagaagaggaagaaacactacactctggaacaagag
ctttcaatcctgtgggagaagatgcgacgtcgagatattgcgaaagaagatagatccaaa
ttggcaagcgaagctctaggaaaaatgaagggcaagattcctgagatcgccagttctcat
gtttcatctcgtgttcttcagacatgtgttaagtactgttcacaagaagaaaagagtgca
gtgtttatggaacttcagccgcattttattagcctagccacaaacacttatgctgttcat
ctggtgacgaagatgttagataatgcatccaaagaccagctgtcagagtttatttcctca
ctgtacgggcatgttgcgcctctgcttcgacacatggtgggctcacttgttattgaacat
gcctatgatgtgggaaatgcaagtcagaaacaaactctacttatggaactatactctccc
gaactgcagttattcaaagatcttgtctctatgaaggaaaccagattagttgatgtaatt
tccaagctacagttgcaaaggtcttctgttgtacgtcacatgagctcagtgcttcaacca
attttggagaaaggaatattagaccactccattatacacagaacactaatggagtatctg
actgttgcagatcagtcatctgctgcagatgtaattcagcagttatcaggtccacttctt
gttcggatgatacacactagggatggttcccgggttggtatactatgcatcaaacatggt
agtgcaaaggagaggaagaaaatcattaaaggaatgaaaggtcagtgtgacaagattgct
cgtgacagatttgggagtatggttcttgtctccattctttcaacagttgatgacacgaaa
ctcttatcaaagatcatcgttcgtgagctggagggcattctgaaggaacttgttctagat
cagaatggaaggcgttcgcttctgcagttacttcatccaaattgttctcgctatttaagc
ccagatgatctcatgtccttaagtttgtctatcccctctctcaacacgaagcaaaaagag
tcttctgaggttaatgaagcaagtgatgaggagaagagagacaatggtgagatcttagtt
gaggcaaatacaggtaaaagtgctgggaagaattcagatgtaaatgaggttgcgaagaag
gatcctttaacgcgaaggagagagttgttgatcaatagtgggcttgccgagaaactcatt
gatgtatgcagtgagatggcagaaaatttgctaaggtcaaagtttggcaaggaagtgatc
tatgaggtagtaactgggggtgctgatggtgttcttcaccctgctatggatgaaaagttg
gaaaaattgtatgaagtaatagcaactcttgtagcagaacctaaatcagagggagcagaa
gacgaccatctccttgaagattttcattctagcaggaccattagaaagcttattctagat
tgccctatctttgcttccaagttgtgggagaaagctctaaagggcaaatgtgcaatatgg
gctcagggtcacagttgtaaggtgattactgcatacctagaggcctcagaccttgccttg
cgtgaagcagcaaagaaagagctgcaacccttaattgatagtggcgttcttacattacct
gcagttaatgagtctgccaaagccgatcaggacttccattaa
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