Coffea arabica (coffee): 113738076
Help
Entry
113738076 CDS
T11342
Name
(RefSeq) phospholipase D zeta 1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00564
Glycerophospholipid metabolism
carb00565
Ether lipid metabolism
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
113738076
00565 Ether lipid metabolism
113738076
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113738076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113738076
Enzymes [BR:
carb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
113738076
Membrane trafficking [BR:
carb04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
113738076
Endosome - Golgi transport
Others
Others
113738076
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
Motif
Other DBs
NCBI-GeneID:
113738076
NCBI-ProteinID:
XP_027121039
UniProt:
A0A6P6X0B1
LinkDB
All DBs
Position
3e
Genome browser
AA seq
1119 aa
AA seq
DB search
MASTEHLVTGGGGGGGGGPRYVQVQSEPLPMMMSSFFSFHHHHGAESARIFDELPKATII
QVSRPDAADISPIMLTYTIEFQYKQFKWQLVKKASQVFYLHFALKKRAFIEEIHEKQEQV
REWLQNLGIGDHTPVIQDDEEAEDETIPLRNDESVKNRDVPSSAALPIIRPALGRQNSMS
DRSKVAMQGYLNHFLGNMDIVNSREVCRFLEVSRLSFLPEYGPKLKEDYVMVKHLPKIPS
DDEHQGCCSCQWFSCCKDNWQKVWAVLKPGFLAFLKDPFDAQPLDIIVFDVLPASDGNGD
GRVSLAKEVKDHNPLRHYFRVSCGIRCIKVRTKANAKVKDWVAAINDAGLRPPEGWCHPH
RFGSFAPPRGLTEDGSQAQWFVDGRVAFEAIALAIEDAKSEIFICGWWLCPELYLRRPFD
AHASSRLDALLEMKAKQGVQIYILLYKEVALALKINSVYSKKKLLGIHENVRVLRYPDHF
STGVYLWSHHEKIVIVDHHICFLGGLDLCFGRYDSFDHKVGDYPPCNWPGKDYYNPRESE
PNSWEDTMKDELDRQKYPRMPWHDVHCAFWGPPCRDVARHFVQRWNYAKRNKAPYEEAIP
LLMPQHHMVIPHYMGINRDIDDEIKNDGNIRKRTKKQESFSARSSCQDIPLLMPQEADGL
DASEGQLKLNGLSREYGFHDQASRPSKSPFSFRKSKVEPINPDMPMKGFVDDLDASHMLQ
ELSSMQPGFKPSGNEWWETQDRSGQVDLADESGQVGPRVSCRCQVIRSVSQWSAGTSQIE
ESIHSAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLEALYQRIMRAYKEKKCFRVI
IVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGRNSILDNLYDHIGPRVHDYISFYGL
RAHGRLFEGGPVASSQVYVHSKIMIVDDCITLVGSANINDRSLLGSRDSEIGVLVEDKEL
FDSLMGGKPWKAGKFASSLRLSLWSEHLGLRAGEVHQIRDPVIDSTYKGIWMATAKTNTM
IYQDVFSCIPNDLIHSRASLRQCMVYWKEKLGQATIDLGIAPNKLESYQDGDIKCTDPLE
RLESVRGHLVSFPLDFMSKEDLRPVFNESEYYASSQVFH
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacggagcacttggtgaccggcggcggaggaggaggaggaggaggcccgagg
tacgtgcaagtgcaatcggagccgctgccgatgatgatgtcatcattcttctcctttcat
catcatcacggagccgagtcagctcgaattttcgatgagttgcctaaggctactattatt
caggtgtcccgccccgatgctgccgatattagccctattatgctcacttatacaattgaa
ttccaatacaaacagttcaagtggcagttagtcaagaaagcttcacaagtattctattta
cattttgcgttgaagaaaagggcatttattgaggaaattcatgaaaagcaggagcaggtc
agagaatggcttcaaaatttaggaataggagatcatacaccggttatacaggatgatgaa
gaagctgaagatgagaccattcctctgcgtaatgatgaaagtgtcaaaaacagagatgtt
ccgtcaagtgctgccctgccaattattcggcctgccctaggacggcagaattcaatgtct
gacagatcaaaagtagcaatgcaaggctacttgaatcactttcttgggaacatggatata
gtgaattcacgggaggtttgcagatttttggaagtctccaggttgtcctttttaccagag
tatggtcctaagctaaaagaagattatgtcatggtgaagcacttaccaaaaatcccaagt
gatgatgaacatcaaggctgttgttcatgtcagtggttcagctgctgcaaagacaattgg
cagaaggtctgggctgtactcaagcctggatttctggccttcctcaaagatccttttgat
gcgcaacctctagatataattgtatttgatgtactaccagcatcagatggtaatggagat
ggccgtgtatcattagcaaaagaagtaaaggatcacaatcctttgcgccattatttcagg
gtatcttgtggaatccggtgcatcaaggtcagaaccaaggccaatgctaaagtcaaagat
tgggttgctgcaattaatgatgctggtcttaggccacctgagggttggtgtcaccctcac
cgttttggatcttttgctcctcctcggggattgacagaagatggtagtcaggctcagtgg
tttgtagatggtcgggtggcatttgaagcgattgctttggcaattgaggatgcaaaatca
gagatatttatttgtggttggtggctctgcccagaactctacctgcggcggccttttgat
gctcatgcatcctctcggcttgatgctttactagaaatgaaagctaagcaaggtgttcag
atttatattcttctatacaaagaggttgccctagctctgaaaattaacagcgtctacagc
aagaaaaagcttcttggcatccatgagaatgtgagagtactacgatatccagaccatttt
tctactggtgtctatttatggtcgcaccatgagaaaattgttattgttgaccaccatatt
tgctttcttggagggcttgacctctgctttggtcgctatgattcatttgatcacaaagtg
ggcgattaccctccctgcaattggcctggaaaggactattacaacccaagggagtcggaa
ccaaattcatgggaagatactatgaaagatgaattagatcggcaaaagtatccgcgtatg
ccatggcatgatgtccactgtgctttttggggaccgccttgccgtgatgttgctagacat
tttgttcagcgttggaactatgcaaagaggaataaagctccatatgaggaggcgatccca
ctccttatgccacagcatcacatggttattccccactacatgggaattaacagagacatt
gatgatgaaattaagaatgatggaaacatccgtaaacgcaccaaaaagcaagaatcattt
tcggctcgatcatcctgccaggatatccccttactcatgcctcaagaagcagatgggctc
gatgcttcagaggggcaattaaaattaaatggtttaagtagggaatatggtttccatgat
caagcaagcaggcccagcaaaagtcctttctctttccgaaagtcaaaagttgaaccaatt
aatccagatatgccaatgaaaggttttgtagatgatcttgatgcctcacatatgctgcag
gagttgtcttccatgcagcctggattcaagccttcaggtaatgaatggtgggaaacacag
gatcgaagtggtcaagttgatctggcagatgaaagtggacaagttggtcctcgtgtttca
tgtcgatgtcaggttataaggagtgtcagtcaatggtctgctggaactagccaaatagag
gaaagcattcacagtgcttactgttctcttatcgagaaggcagaacacttcatatatatt
gagaatcaattcttcatctcaggtctttctggagacgagatcatacggaatcgtgtactg
gaagcattataccaacgcattatgcgagcttacaaggaaaagaagtgtttcagagttata
attgtcataccacttcttccaggcttccagggtggtgtggatgatggtggcgcagcatct
gtgagagcaattatgcattggcagtatcgaacaatatgcagaggacgtaattcgatattg
gacaatctttatgatcacatcggacctcgagtgcatgactatatatctttctatggtctt
agagctcatggtagactttttgaaggtggtcctgtggcctccagtcaggtgtatgtacat
agcaagatcatgatagttgacgattgtataactctagttggatctgctaatatcaatgat
agaagtttgcttggctcaagggactctgagattggtgtactagttgaggacaaagaactg
tttgattcattaatgggaggcaagccatggaaggctgggaagtttgcatcgagcttgcgg
ctttctctatggtctgagcaccttggtcttagagctggagaggtccatcaaataagagat
ccggtgattgattctacatataagggaatatggatggcaactgccaagacaaataccatg
atctaccaagatgttttttcttgtatacccaatgatctaatccattccagggcttctctc
cgtcaatgcatggtctactggaaagaaaaacttggccaggcaaccattgatttaggaata
gccccaaataagctcgagtcttatcaagatggggatattaaatgcactgatcccttggag
aggttagaatctgttagggggcatcttgtttctttccctttggatttcatgtccaaagaa
gatttaagacctgtgttcaatgaaagcgagtactatgcatcatctcaagtttttcactga
DBGET
integrated database retrieval system
