Coffea arabica (coffee): 113738131
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Entry
113738131 CDS
T11342
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
carb Coffea arabica (coffee)
Pathway
carb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113738131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113738131
03036 Chromosome and associated proteins [BR:
carb03036
]
113738131
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
113738131
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
113738131
RSF complex
113738131
WICH complex
113738131
B-WICH complex
113738131
NORC complex
113738131
BRF complex
113738131
NuRF complex (fruit fly)
113738131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
HDA2-3
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
113738131
NCBI-ProteinID:
XP_027121121
UniProt:
A0A6P6X2C2
LinkDB
All DBs
Position
3e:complement(1842038..1851954)
Genome browser
AA seq
1086 aa
AA seq
DB search
MARGTRAMKESSPSSEEEEEEEEPLSNSSEDEEVERGVNINDQVEEEEDEEELEAVARTA
DDSDEEENDAAANDGGGEPDDDDEEEGNGNDVGTAVVKREKERLKEMQKLKKQKIQEILD
AQNAAIDADMNNKGKGRLKYLLQQTELFAHFAKGEQSAPQKKAKGRGRHASKLTEEEEDE
ECLKEEEDGLSGTGNTRLVAQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGK
TLQTISLLGYLHEYRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPDERKYIR
EELLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNY
RLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPF
LLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQL
RKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD
ILEDYLMYRGYLYCRIDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADV
VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQ
QGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKF
TEDAIKFKMDDSADFYDFDDEKDENKFDFKKIVSENWLEPPKRERKRNYSESEYFKQTMR
QSGPARPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKDTIDVEEPED
VGEPLTSEEQEEKERLLEEGFSTWSRRDFNTFIRACEKYGRNDIKGIATEMEGKTEEEVE
RYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQ
NKGKLYNEECDRFMICMVHKLGYGNWDELKSAFRTSPLFRFDWFVKSRTTQELARRCDTL
IRLVERENQEFDERERQARKEKKLAKQNMTPSKRAMARQATESPPISKKRKQLLMDDYVS
SGKKRK
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggctagaggtactcgggctatgaaggagtcatctccgtcatcggaggaggaggaggag
gaggaggagccgctgtcaaattcatcggaagatgaggaagtggagcgaggagttaatatt
aatgatcaagttgaagaagaagaagatgaggaggagctcgaagccgttgcgagaactgcc
gacgattccgacgaagaagaaaatgatgctgccgctaacgatggtggtggtgagccggac
gacgacgacgaggaggaaggaaatggcaatgatgtgggcactgcagttgttaagcgtgaa
aaagaaaggctaaaagaaatgcaaaagttgaaaaaacaaaaaatacaagaaatattggat
gctcaaaatgctgccattgatgctgacatgaacaacaaaggaaaagggcgtttgaagtat
ctacttcagcagacagagttatttgcccattttgccaaaggagaacagtctgctccccag
aagaaggctaaaggaaggggtcgccatgcgtcgaagcttaccgaagaggaagaagatgaa
gaatgtctcaaagaggaggaagatggtctctctggaacaggaaatactagacttgttgca
caaccttcttgtattcagggaaagatgagggactatcaacttgctggtttgaactggctt
atacgactctatgagaatggcataaatggaatccttgcagatgaaatgggactggggaaa
acattgcaaaccatctcgctgttaggatacctccatgaataccgaggaataactggtcct
catatggttgttgctcccaaatctacacttggcaattggatgaatgaaatccgtcgattt
tgccctgtgcttcgtgctgtaaagttccttggtaatccagatgaaagaaaatatatccgt
gaggagttgcttgttgctgggaaatttgatgtatgtgtaacaagttttgagatggccatt
aaagagaagtctgctttacgtcgctttagctggcgctacatcataattgatgaagctcat
agaatcaagaatgagaattctcttctgtcaaagacgatgaggctttacaatactaattat
cggcttcttatcactgggacaccactgcagaataaccttcatgaactgtggtctcttttg
aactttttgctaccggagatcttcagttcagctgaaacttttgatgaatggttccaaatt
tctggtgagaatgaccagcaggaggttgtgcagcagcttcacaaggttctccggcctttc
cttctgagaaggttgaaatcagatgtcgagaaaggtttgcctccaaagaaggaaacgatc
cttaaagttggtatgtcccagatgcaaaagcaatactacagagctcttttacagaaggat
cttgaagtcgtaaatgctggtggagagcgcaaacgtcttcttaatattgcaatgcagcta
cgtaaatgttgtaaccacccatatcttttccaaggtgctgaacctggacctccttatact
acaggagaccatctgatagagaatgctggcaaaatggttcttttggataagctgcttccc
aagttaaaagagcgtgattcacgggtgttgatattctcacagatgacgaggttgcttgac
attcttgaagactatttgatgtaccgtggatacctgtattgtcgcattgacggcaatact
ggtggggaagatcgtgatgcttccattgatgcctttaacaaaccagggagtgaaaaattt
gtatttttgttgtcaactagagctggagggcttggtattaatcttgcaactgcagatgtg
gtcattctctacgatagtgactggaatccacaggtggatttacaggcccaggatcgtgct
cacagaattgggcagaagaaagaagtacaagtcttccgtttctgcactgagtatacaatt
gaggaaaaagtgattgagagggcttataagaagcttgcacttgatgctttggttatccag
caagggaggttggctgaacaaaagactgttaataaagatgagttgctgcaaatggtgaga
tttggggcagagatggttttcagttccaaagatagtacaataactgatgaagatatagat
cggataattgctaaaggagaagaggcaacagctgaacttgatgcaaagatgaagaagttc
acagaagatgcaattaagttcaaaatggacgactctgctgacttctatgattttgatgat
gaaaaggatgagaacaagtttgatttcaagaaaattgtgagtgaaaattggctggaaccc
cctaagagagagcggaagcgcaattactcagaatcagaatactttaagcaaacaatgcgc
caaagcggtcctgcaagacccaaagagccacgaattcctcgaatgccacagttgcatgac
tttcagttcttcaacacacagaggcttagtgagctatatgagaaagaagtgcgctatcta
atgcaaacacatcaaaagaatcaattgaaggatacaatagatgtggaagaacctgaagat
gttggagagcctttgacttccgaagagcaggaagagaaggagcggttgttggaagaaggg
ttttcaacatggagtagaagagacttcaatacctttatcagggcctgtgaaaagtatggc
agaaatgatataaaaggtattgctactgaaatggaagggaaaacagaggaagaggttgaa
agatatgcaaaggttttcaaagaaagatacaaggagttgaatgattatgataggatcatt
aagaacattgaaagaggagaggccagaatatctcggaaagatgagatcatgaaagccatt
ggaaagaaattggatcgctataagaatccatggctggagttgaagatccaatatggtcaa
aataaagggaaattgtacaatgaagagtgtgatcgattcatgatatgcatggttcacaaa
cttggatacggaaactgggatgagctgaagtcagcatttcgcacatcacctttgtttcgt
tttgattggtttgtcaagtctcgcaccactcaagaacttgcaaggagatgtgatacgcta
attcgtttggttgagagggaaaaccaggaatttgatgaacgtgagagacaagcccgtaaa
gagaagaagcttgcaaagcaaaatatgactccatctaaacgtgcaatggcaaggcaagct
actgagagccctcctatttcaaaaaagcgcaagcagttgctgatggatgattatgtaagc
tcggggaagaagaggaagtga
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integrated database retrieval system
