Coffea arabica (coffee): 113738223
Help
Entry
113738223 CDS
T11342
Name
(RefSeq) RAN GTPase-activating protein 2-like
KO
K14319
Ran GTPase-activating protein 1
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113738223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113738223
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113738223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
113738223
NCBI-ProteinID:
XP_027121265
UniProt:
A0A6P6X0Z0
LinkDB
All DBs
Position
3e:complement(2840758..2843597)
Genome browser
AA seq
541 aa
AA seq
DB search
MDSVTSHPQRRPFSIKLWPPSQNTRQMLVERMTNNLSDPTIFTRKYGSLSREEATKNAQQ
IEETAFALANQHYEKEPDGDGSSAVQLYAKECSQLILDILKKGPSTEDKEVLKPKDVFSP
DETFFDISKGQRAFIKAEEAEELLRPLKEPGNCYNKICFSNRSFGTDAALVAAPILSSLK
GQLKEVDLSDFVAGRPEEEALEVMKIFSAALEGSVLKSLNLSHNALGEKGVRAFGELLKS
QTSLEALYLMNDGISEEAARAVCELVPSTDLLTVLHFHNNMTGDEGAIAISEVVKRSPLL
EDFRCSSTRVGSDGGIALSEALGTCTYLRKLDLRDNMFGLEAGIALSKALSFHANLTEVY
LSYLNLEDKGAIAIADALKSTAPLLEVLDIAGNDITAEAAPALAACVAAKQHLTKLNLAE
NELKDDGAIQISKALEESHDKLKEVDVSSNSLRRVGARTLAQSVVHKPDLKLLNVDGNFI
SDEGIDELKDIFKKFSDKLAPLDENDPDGGDDDDQESGDGSEGSEEELESKLEKLDVKEE
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtgacttcacatccacaacgccgaccattttcaatcaaactctggccccct
agtcagaacacacgacaaatgcttgtggagaggatgacaaataatctttccgatccaacc
attttcacccgcaagtatggcagtctaagcagggaggaggctaccaaaaatgcccaacaa
attgaagagacagcttttgctttggccaatcaacattacgaaaaggagcccgatggtgat
ggaagttctgcagtgcagctttatgctaaggaatgtagccagctcattctggacattctt
aaaaagggacccagtacagaggacaaagaggttctgaaacctaaagatgtcttttctcca
gatgaaacttttttcgatatttctaaaggacagagggcatttataaaagcagaagaagct
gaggaacttctgaggccgctcaaagaaccagggaactgttacaataaaatatgttttagt
aacagaagttttggcactgacgcagcccttgttgcagctcctatattgtcatcactcaag
ggacaattgaaggaagttgacttgtccgattttgttgcaggaagacctgaggaagaggct
cttgaagtcatgaaaatattttcggctgcactggaaggttctgttttgaagtctttgaat
ctttcacacaatgccttgggtgaaaagggagttagggcatttggggagctcctgaagtca
cagactagtttggaggcattgtatctgatgaatgatggtatctctgaggaagctgcacga
gctgtttgtgagttagttccatcaactgatctacttacagttctccatttccacaataat
atgactggagatgaaggggctatagctatctctgaagttgtaaagcgttctccattactt
gaggatttccgatgctcttctaccagggtaggctctgatggaggaattgccttgtctgaa
gcacttggcacatgtacctatctcaggaaacttgatttgcgggataacatgtttggtctg
gaagctggcattgcacttagtaaggcactttctttccatgcaaatctcactgaggtttat
ctgagctacctgaatttggaagataagggggcaattgcaatagctgatgcacttaagagc
acagcccctctacttgaagtgttggacatagctggaaatgatataacagctgaagctgct
cctgctttagctgcctgtgtagctgcaaagcagcacctcaccaagctgaacttggcagag
aatgaactgaaagatgatggtgccattcagataagcaaggctctggaggaaagtcatgac
aaattgaaggaagttgatgttagctccaattcattgagaagggttggagcaaggacgtta
gctcagtccgttgtgcacaagcctgacttgaagttgctgaatgttgatgggaacttcatc
tctgatgaaggcattgatgagttaaaagatatcttcaaaaaattctctgacaagctggca
cctcttgatgagaatgaccctgatggaggggatgatgatgaccaggaatctggggatgga
agtgaagggagtgaagaggaattagaatcaaaacttgagaagcttgatgtcaaggaagag
aaatag
DBGET
integrated database retrieval system
