Coffea arabica (coffee): 113738417
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Entry
113738417 CDS
T11342
Name
(RefSeq) F-box/LRR-repeat protein 14-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113738417
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113738417
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
F-box_5
LRR_6
LRR_At1g61320_AtMIF1
LRR_14
F-box-like
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
113738417
NCBI-ProteinID:
XP_027121409
UniProt:
A0A6P6X1F4
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Position
4c:3801046..3803471
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AA seq
468 aa
AA seq
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MDYLPDQLLWEILDRIKKTADRNSVSLTCRRLHKVDSEQRKFIRVGCGLDPATESLASVC
NRFPYLERVEIIYSGWMSKLGKQLDDQGLGVLSSNCSLLKDLTLSYCTFITDAGLSSLAS
CSKLSALKLNFAPRVTGCGILSLVMGCKKLAVLHLVRCLNISSVEWLEYLGKLETLEDLC
IKNCRAIGEGDLIKLGPSWRKLKQLQFEVDANYRYMKFYDRLAIDRWQKQWIPCSSMLEL
SLVNCIISPGRGLACVLGKCSNLEKIHLDMCVGLRDADIVCLAHKSKNLRCISLRVPSDF
SLPLLMNNPLRLTDESLKALAENCSQLDSVRLSFSDGEFPSLSSFTLDGILALIQMCPIR
ELALDHVYSVNDFGMEALRSAKHLEILELVGCQEVTDEGLQLVGQFLQLRVLRLSKCLGV
TDDGLKPLVGACKLEMLVVEDCPQISERGVQGAAKSVNFRQDLSWMYS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggattatctgcctgatcaattactttgggagatcttggacaggataaagaagaccgca
gatagaaactctgtatcactaacttgtaggcgccttcacaaagtggatagtgaacaacga
aaatttatccgggttggatgtggattggatcctgccacagaatccttggcttctgtctgc
aacaggtttccgtacttggaaagggtggagatcatttactctggttggatgtccaaatta
ggaaaacagttggatgatcaagggcttggagtcctttccagtaactgttctttgctaaag
gatctaaccttaagttactgtacctttattaccgatgctggtctaagttccctggcttct
tgttctaaactttcagcactcaagctgaattttgccccaagagtaactggttgtgggata
ttatctcttgtcatgggttgcaaaaagcttgcagtgcttcaccttgttcgatgccttaac
ataagcagcgttgaatggttggagtatttaggcaagcttgaaactcttgaagatctttgt
attaaaaattgtagagcaattggagaaggtgacctgattaagcttggaccaagttggcgg
aaattaaagcagctacagtttgaggttgatgcaaactacagatacatgaagttttacgat
cggttggccatagatcggtggcaaaagcaatggatcccttgtagtagcatgttggagcta
agtttggtgaactgcatcatcagccctggaagggggcttgcatgtgtcttggggaagtgc
agtaacctggaaaagattcacttggacatgtgtgttggcttgagggatgctgacattgtt
tgtttggcacacaaatcaaaaaatcttcgatgcatatcacttcgagtgccttcagatttt
tcacttccccttttgatgaacaatccattgagattaactgatgagagcttaaaggcattg
gctgagaattgttcacagctggattcagttaggttgtctttctcagatggggagtttcct
tcattgtcctcgtttactttggatggaatccttgctctcatacaaatgtgcccaatcagg
gaacttgctctggatcatgtgtactctgtgaatgattttggtatggaagctcttcgttca
gcaaagcacctcgagatcctggagcttgtgggatgccaagaagttacagatgaggggcta
cagctcgtaggccaattcctgcaattgcgtgttttacggctcagtaagtgtttgggtgtt
actgatgacggattgaagccacttgttggagcatgtaaactggaaatgttagttgtggaa
gattgtcctcagatatccgaacgaggtgtccaaggagctgcaaagtctgtgaatttcagg
caggacttatcatggatgtactcataa
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