KEGG   Coffea arabica (coffee): 113738420
Entry
113738420         CDS       T11342                                 
Name
(RefSeq) protein decapping 5-like
  KO
K18749  protein LSM14
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    113738420
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     113738420
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 113738420
NCBI-ProteinID: XP_027121417
UniProt: A0A6P6X6B3
LinkDB
Position
4c:complement(6273576..6281546)
AA seq 692 aa
MAAPGASSVAPMVTDKGKKVETETTDAARGVEAYIGSLISLITKSDIRYEGFLFHLSPQE
SIIGLRNVKSFGTERQKMDGTQVAPSDRLYEYIYFRGTDIKDLQVISFPHVQSTPTLPDD
PAIIQPHHSNPPSTNISLASSSALVGSNPSSNSHLGVNVLPPEGNTAPRRSMELSDSWAS
VIPLPPVNINGPSMQSYWPGFTGFPGEKSHLQQITYPPQPQGLLLPNSIQQQLPHPSVNA
SFPGNALNFIELPQNLLPPACFGSVNLISTSPLPSTVQYSHIPLSTLLSNLSSTPMSSNI
SNALPTDQPLSMEVVDSGSEKEPSLVIASNVNSAVPPSNNQAQSLLGPAPFPLISKFTSS
FVGSSTTPHVRGSNVSPAIPGSFWERRPVNALSPHNCTDGNSNLGSPSNHQPSDLQNIEE
LAIELPKSPARKLYDPASSSHPGSQHHGQVQGRGRGDLIYGDMHLRYQSNRDRMLGRGRG
NLPNRAFSHNYQTCRGHPVGRGNPLIGTASYRHQAPRGQGRANAPNAAGPYYRRHGGSPA
WGSSEADANFTEDFDFEAMNAKFNKKEIWGLLDKAKQGGSEDNKEDEIGRKGKEAVDESG
NGLPKLDNKSAYYKDDFFDSLSCPTLDGESYRGKVSELRKTDDEKIGEILQHRRDHGIQG
PYRGGNSQGSYRGRGYYNAGRGHAKAAWSRAT
NT seq 2079 nt   +upstreamnt  +downstreamnt
atggctgcgccgggggcgtcctcagtggctccgatggtgacggacaaggggaagaaggtg
gagacggagaccaccgatgcagcgagaggagtggaagcgtacattggaagcctaatcagc
ttgattacaaagtcggatattcgatatgaaggattcttgtttcatctcagcccgcaggag
tccatcataggcttgagaaatgtaaaatcttttggaacggagagacaaaagatggatggt
acccaggttgcacccagtgacagactttatgaatacatatacttccgagggaccgacatt
aaggatcttcaggttatctcttttccacatgttcagagtacaccaactttacctgatgat
cctgccattatacagccacatcattctaacccaccatctacaaatatcagtttggcttct
tcaagtgccttggtaggttcaaatcctagttccaattctcatttgggagttaatgttctg
ccacctgaaggaaatacagctccccgtcgatccatggagttatctgactcttgggcttca
gtaattcctcttccaccagtaaacataaatgggcctagcatgcaaagttattggcctgga
tttactgggttccctggggaaaaatctcatcttcagcagataacttatccgccgcaaccc
caaggcttattgttaccaaattcaattcagcagcaattgccacatccgagtgtgaacgca
tccttccccggaaatgcattaaatttcattgaacttccgcagaacttgttgccacctgct
tgttttggttctgtgaatttaatatctacatcgccactgccttcaactgtgcaatatagc
catatacctctttctacattgctttccaatctatcctccacaccaatgtcaagtaacatt
tccaatgcccttcctacagatcaacccctttcgatggaagtggttgattctggctctgaa
aaagagccttcgttggtaatcgcttccaatgtgaactctgcagtacctccatctaacaac
caagctcagtccttgcttggccctgctccatttccattgatatccaaattcacatcaagt
tttgtgggttcatccaccactcctcatgtgaggggatcaaatgtatctcctgcaatccca
ggttcattttgggagcgaaggccagtaaatgcattgtctcctcacaattgtacagatggg
aacagtaatttaggatcaccatccaaccatcagccatcagatttgcagaatattgaagaa
ctagcaatagaactgccaaaatcaccagctcgaaagctgtatgatcctgcatcatcatct
caccctggtagccagcaccatggacaggttcaaggacggggtcgaggagatttgatttat
ggagatatgcatctccggtaccagagtaatagagatcgtatgcttggaaggggtcgagga
aatttgccaaatagagctttttcacacaattatcagacctgtagaggtcatccagttgga
agaggaaatccgctgattggcactgcttcataccgtcaccaggctcctagaggccaggga
agagcgaatgcgccaaatgctgctggaccatattatcgccgccatggtgggagtcctgca
tggggaagcagtgaggctgacgccaactttactgaggattttgactttgaggcaatgaat
gccaaatttaataaaaaggagatctggggtcttcttgataaagccaagcaaggtggatca
gaagataacaaagaagatgaaatagggcgtaaaggaaaagaagcagtagatgaatctgga
aatggactgccgaagctagacaataagagcgcttactataaggatgacttctttgattca
ctttcatgccctaccctggatggtgagtcttacagagggaaggtttcagagcttagaaag
acagatgacgagaaaattggcgagattctgcaacatcgaagggatcatggcattcagggg
ccatataggggagggaattcacagggttcctaccgtggaagggggtattacaatgcagga
agaggccatgcgaaagcagcttggagccgtgcaacttaa

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