Coffea arabica (coffee): 113738508
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Entry
113738508 CDS
T11342
Name
(RefSeq) tubby-like protein 8 isoform X1
KO
K19600
tubby and related proteins
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
carb03037
]
113738508
04990 Domain-containing proteins not elsewhere classified [BR:
carb04990
]
113738508
Cilium and associated proteins [BR:
carb03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113738508
Domain-containing proteins not elsewhere classified [BR:
carb04990
]
Other domain-containing proteins
Tubby family proteins
113738508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tub
Motif
Other DBs
NCBI-GeneID:
113738508
NCBI-ProteinID:
XP_027121544
UniProt:
A0A6P6X1T9
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Position
4e:complement(3998444..4001703)
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AA seq
439 aa
AA seq
DB search
MSEFKKTSVFPRQSSYNSLYANPLSELRHNRSSSEGGNSGNNIVPLAVHIRRNLNPANVP
SDDKENFTPNRTQIGCWNDKENAGFCKGIRLDPGDFVPNCPNLNTKDRALKPSSLQLCMK
KHEPDSIIGTRTLEPVDSGTTNSGNIWDYSDSEAAPASSWSTLPNRSLLCRPLPVDIGRC
TCLIVKEPSPEGLDKGTLYSLYTHEGHGRQNRKLAVAHHRRRNGRSEFLVASCVKGLVSG
QDDSLIGNMTANLMGSKYHLWGQGNQLNPLTKLFKLLAVVTFTPTITTWTGSHRSIKAWI
PKHQSMQLKNVTQHINGLPLDWKEKMDKVHQLFSRVPHYNKVNISKKYELDYRDRGRTGL
RIQSSVKNFQLTLEPQVLFHIDDTLHNDVDRFSKRFSVSLEEWKADNPPAWKGGEVQLCD
GFQISHDWISGLLHQFSFY
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattcaagaaaacctcagtgtttcctcggcagtcttcgtataattccttatat
gctaatcctctcagtgagctcaggcataaccggagctccagcgaaggtgggaattcaggc
aacaacattgttccccttgctgtgcatattcgaaggaatctcaaccctgctaatgttcct
tctgatgacaaagagaattttactcctaataggactcaaattgggtgctggaatgataaa
gaaaatgcaggcttctgtaaagggattcggctagaccccggggattttgtccctaattgt
cctaatttgaatacgaaagacagggctttgaagccgtcttcacttcagctatgtatgaag
aaacatgaacctgattcgataattgggaccagaactttggaacctgttgattctggaact
acaaattctgggaatatttgggattactctgattcagaggctgcaccagcttcctcctgg
tctactctgcctaataggtcattgttatgtaggcctttacctgtggatattggaaggtgt
acttgtctcatagtgaaggaaccatctccagaaggactggataaagggaccctctactct
ctttacactcatgagggtcatggcagacaaaacagaaagcttgctgttgctcatcacaga
aggcgaaatggaagatcagaattcttggtggcatcatgtgttaagggattagtaagtggt
caggatgacagtttaattggcaatatgacagcaaatcttatgggttcaaaataccattta
tggggccagggaaatcaactcaatcccttgaccaaactgttcaaattacttgcagttgta
acgtttactcctaccataactacctggactggtagtcatagaagcatcaaggcatggata
ccaaagcatcaatcaatgcagctaaagaacgtgactcagcatatcaatggactacccctg
gattggaaggagaaaatggacaaagtacatcaactgttctcaagggttccacactacaat
aaggtaaatatttcaaagaagtatgaattagattatagagacagaggaaggacaggactt
cggatccagagctcagtaaagaatttccagctgacattggagccccaggttctgtttcac
atagacgacactttgcataatgatgtcgatcgattttctaaaagattctctgtgtcacta
gaagaatggaaggcagacaatcctccagcttggaagggtggggaagtccaactatgtgat
ggatttcagatatcccatgactggatttcaggccttctgcatcagtttagcttctattga
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