Coffea arabica (coffee): 113738627
Help
Entry
113738627 CDS
T11342
Name
(RefSeq) tRNase Z TRZ1 isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113738627
Enzymes [BR:
carb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
113738627
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
113738627
Prokaryotic type
113738627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
113738627
NCBI-ProteinID:
XP_027121667
UniProt:
A0A6P6X486
LinkDB
All DBs
Position
4c:complement(51345674..51350971)
Genome browser
AA seq
295 aa
AA seq
DB search
MEEEKKKSKFGGQRREQGKRGLEIEGYQIEGISIAGHETCVIIPSLNLAFDIGKCPQRAI
SQQFLFISHGHMDHIGGLPMFVATRGLYRMAAPTVIVPKTIKENVETIFQAHRDMDQSEL
NHTLIGLDVGEEFYLRKDLKVKAFKTYHVIPSQGYVVYSVKQKLKDEYIGLPGNEIKKLR
LSGVEITYTTTTPEVAFTGDTTSDFIVDSNNIDALRAKVLIMESTYVEDTMTVDDARDYG
HTHLSEIIHHADLFENKAILLIHFSSRYQLDVIQHAISSLAPPLAGRVFALTDGF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaagaagaagagcaaattcggtggccaaagaagggagcaaggaaagagg
ggattggaaattgaagggtatcaaattgaagggatatcaatagcagggcatgagacctgc
gtgataatcccttctctcaacttagcttttgacattggaaaatgcccacaacgtgctatt
tcgcaacagttcctctttatctcccatggccacatggatcacattggaggactgccaatg
tttgttgcaactcgtggattatacagaatggcagccccaactgtaattgtgccaaaaacc
ataaaggaaaatgttgaaacgatttttcaagcacatagagatatggatcaatcagaattg
aaccatactttgattggcttggatgtgggagaagaattttacttgagaaaggaccttaaa
gtaaaagccttcaagacttaccatgtcatacccagccagggttatgtagtttattcagta
aagcagaaacttaaggacgaatatattgggcttccagggaacgagataaagaaattgagg
ttatcaggtgtggagattacatatactacaacaacgcctgaagttgctttcacaggagac
acaacgtcagacttcattgtggatagcaacaatattgatgctttaagagcaaaggtcctt
attatggaaagcacatatgttgaagacaccatgacggtggatgatgcaagggattatggg
cacacgcatttgtcagagataattcaccatgcagatctgtttgaaaacaaagcgattctt
ttgatccacttttcgtctcgctatcaattggatgtcattcaacacgcaatttcttcactg
gctccacctttggcaggccgagtatttgcccttacagatggtttctaa
DBGET
integrated database retrieval system
