Coffea arabica (coffee): 113738688
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Entry
113738688 CDS
T11342
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
carb Coffea arabica (coffee)
Pathway
carb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
113738688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
carb04040
]
113738688
Ion channels [BR:
carb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113738688
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Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
113738688
NCBI-ProteinID:
XP_027121732
UniProt:
A0A6P6X766
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Position
4c:complement(15168043..15178180)
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AA seq
695 aa
AA seq
DB search
MNHLYLHLESTKFLHHLPPIQSLLYDHHKPWWQQILDPNGEFVNKWNRIFLATALTALFI
DPLFFFLPMLRTDCMRIDVSTAVTLISLRTVVDLFSVLQISMKFRTAYVAPSSRIFGKGD
LIMDPRKIAFRYLKTDFVIDLTAALPIPQFLVWFVMPLNQQPAAARANHAISLVIMLQYI
PRLFVIFPLNWKIIKNTGVVAKTAWSGAAYNLILFMLASHVLGASWYLMSFERHLTCWRM
ICEKEKTRHHCDTLFLDCLKSGDEKDAWKKSTKAFTTCTPDKFEFGLFAEAYEDQITSVN
IAERYFYCLWWGLRNLSSYGQNLAASTQVVETLFSCLICLVGLSFFGFLIGNMQTYLEST
TARLEEWRVKRRDTEEWMRHRQLPPDLQDRVRRFVQYKWLATRGVDEEEILQALPLDIRR
EIQRHLCLNLVRRVPFFSQMDDQLLDAICERLVSSLNTKDTYIVREGDPVAEMLFIIRGE
LESSTTNGGRSGFFNSITLKPGDFCGEELLTWALMPTSNLNLPSSTRTVKSLTEVEAFAL
RAEDLKFVANQFKRLHSKRLQHAFRYYSHQWRTWGACFIQAAWRRLKRKRLAEELARQEY
SCNLQFFDEDSQYGDAFAAAVYGSTTTGTAAMDGIPQHLGATVLASRFATNTKRGPKVTR
VEAASSSLPMPKLFKPDEPDFHADKEYTKDTEEFD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatctctacctccacctcgaatcaaccaagttcttgcaccatcttccaccaatc
caatctctactctacgatcaccataagccatggtggcagcaaattctcgaccccaacggg
gagtttgtcaacaaatggaaccgcattttcttggccacggctctcactgctctgttcata
gatcctctgttcttcttcctcccaatgctgcggacagactgcatgagaatagatgtaagc
acagccgtcaccctcatctccctcagaaccgttgtggatctgttttctgtgctccaaatt
tccatgaagttcagaactgcctatgttgctccgagctccaggatctttgggaaaggagac
ttgattatggatcccaggaagattgcgtttcgatacttgaaaactgattttgtcattgat
cttactgctgctcttcccatccctcaatttcttgtctggtttgtgatgccattgaatcaa
caacctgcagctgcccgtgctaatcatgccatttctctggtgataatgcttcagtacata
ccgaggttgtttgtcattttccctctgaattggaaaattataaaaaacactggggtagtg
gcaaagactgcttggtcaggagcggcatacaatctcattctctttatgctagctagtcat
gttttaggagcctcatggtacctaatgtcctttgagcgacatcttacatgctggaggatg
atatgtgaaaaagagaagacacgtcatcattgtgacactctcttcctagattgtcttaaa
tccggagatgaaaaggatgcttggaagaaaagcactaaggcattcacgacttgtacacca
gacaagtttgagtttgggctatttgctgaagcctatgaagatcaaataacttccgtgaac
attgctgagagatatttttactgtctttggtggggcttgcggaacctcagttcttatggg
caaaatttagcagcaagtacccaagttgtggagacacttttcagctgtcttatttgtctt
gtgggactaagtttttttgggtttctaattggcaatatgcagacctatttggaatctacc
acggcaagactcgaagagtggagggttaagcgaagagatactgaggaatggatgagacat
cgtcaactacctccagatttgcaggatcgtgttcgtcgttttgtccagtataaatggctt
gctacaagaggagtagatgaagaagaaatcttgcaagccttacccttagacatacgccgc
gaaattcaaaggcatctttgcctgaaccttgtccgccgagttcctttcttctctcaaatg
gatgaccaactcctagatgcaatatgtgaacgtcttgtttcatcattgaataccaaagac
acgtacattgtccgagaaggtgatccagttgctgagatgcttttcatcatcagaggtgaa
cttgagagctcaactaccaatggtggacgctctggtttttttaactccattactcttaaa
cctggtgacttctgtggtgaagaactgctgacatgggccttaatgcctacatcgaacctc
aatctcccatcctcaacgcgtactgtcaaatcacttactgaagtcgaagcatttgcactt
cgtgctgaggacctcaaatttgtcgcgaatcaattcaaacggcttcacagcaagaggtta
caacatgctttccgatattactcacaccagtggaggacatggggagcttgcttcatacaa
gctgcttggagacgactcaaaagaaagaggcttgcagaagagctggcaaggcaggaatac
tcgtgcaatctgcagttctttgatgaagacagccagtatggtgatgcatttgcagctgca
gtttatggaagtactactactggcactgctgcaatggatggcattccccaacatttagga
gctacagttttggcttcaagatttgctaccaacactaaaagaggcccgaaggtcacaagg
gttgaagctgctagctcaagtttaccaatgccaaagcttttcaagcctgacgaacctgat
tttcacgcagacaaagagtacactaaggacaccgaagaatttgattga
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