Coffea arabica (coffee): 113739682
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Entry
113739682 CDS
T11342
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD1-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
carb Coffea arabica (coffee)
Pathway
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113739682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113739682
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
113739682
Membrane trafficking [BR:
carb04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
113739682
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113739682
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113739682
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
Ank_5
Ank_4
Ank_3
PH
BAR
PH_11
PH_8
ANK_LRRK2
PH_20
BAR_2
Ank_KRIT1
PH_13
PH_alsin
Motif
Other DBs
NCBI-GeneID:
113739682
NCBI-ProteinID:
XP_027122773
UniProt:
A0A6P6X4V2
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All DBs
Position
4c:4663487..4673402
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AA seq
827 aa
AA seq
DB search
MQEEKMQFARLDDSPMFRQQIQCLEESAENLRERSVKFFKGCRKYTEGLGEAYDRDIAFA
SALETFGGGHNDPISVAFGGPDMAKFAIALREIGMYKEVLRSQVEHILNDRLLHFANVDL
QDVKEARKRFDKANVTYDQVREKYLSLRKSTKNDVAAALEEELHNSRSVFEQSRFNLVGA
LSTVEAKKRFEFLDAVGSAMDAHLRYFKQGYELLHQMEPYINQVLAYAQHARESSNYEQA
ALNERMQEYKRQVDQESRRSFNGSIGSPSHDIVQQFPRGSHKVIEAVMQSALEGKVQTIK
QGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQWSRSSFPGSGSHFHVHRSSPSEPSSG
LLSRWLSSHYHGGVHDEKSVARHTVNLLTSTIKVDADQSDLRFCFRIISPAKNYTLQAES
ATEQMDWIDKITGVIASLLSSQEPEKHFAASPSSESSSIGSPDYDHGTIEEHSSDKEFAS
RNLIRSSKSALQLHHSMKIDKPVDTLKRLPGNDVCADCGALEPDWASLNLGVLICIECSG
VHRNLGVHISKVRSLALDVKVWEPSVIALFQALGNVFVNSIWEGLLNARKTFQADEIPRR
FFESDKHKQFFSKPSHDDHISVKEKFIHAKYAEKRFVQKVNDSKHLLSVAEQLWESVRMN
DKKSAYRLIVICEVDVNAILRQASLTTPLSLAKPMRLQDHANAHQNFDNMDGGSVLSANA
ESISHSQFINYLLDGCSLLHLACQIADVSMVELLLQHGANINSCDSRGQAPLHHAIIRGR
IAIVKLLLTRGADPQAPDKEGKTPLQLVKESDLDDVEIIAVLKNASR
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggaaaagatgcagttcgcaaggcttgatgattcaccgatgttccggcaacag
atccaatgtttggaagagagtgctgagaatttaagggaaagaagtgtaaagttctttaaa
ggatgccggaagtacacagaaggtcttggagaagcatacgatagggacattgcttttgca
agtgctcttgaaacatttggaggcggtcacaatgatcccatttctgttgcatttggaggc
cctgatatggctaagtttgcaattgctctgagagaaattggaatgtacaaggaagttctt
cgatcgcaggtggagcacatactaaatgataggctactgcactttgctaatgttgatctt
caagatgtcaaggaagctcgtaagcgttttgataaggctaatgttacttatgaccaggtc
cgcgagaagtatttgtcattgaggaaaagcactaaaaatgatgtagctgctgcgttagag
gaggaacttcataattcaagatctgtgtttgagcaatcacggttcaatctggttggtgct
ctttctactgttgaggcaaagaaacgattcgagtttttggatgctgtaggtagtgcaatg
gatgctcatcttcgttatttcaaacagggatacgagctattgcatcagatggagccttac
ataaaccaggtcttggcttatgcacagcatgcaagagaaagttccaattatgagcaggca
gctctaaatgaaaggatgcaggagtacaaaaggcaggttgatcaagagagtagaagatca
ttcaatgggtccattggttctccaagtcatgatatagtacaacaattccctagaggttcc
cacaaagtcatagaggcagttatgcagtctgcactggaagggaaggtgcaaaccattaaa
caaggatatctctcaaaacgttcttctaatttaagaggtgactggaagagaagatttttt
gtcttggatagcagaggaatgttgtattactatcgcaaacaatggagcaggtcatctttc
ccaggatctggaagtcactttcatgtacatagaagttctccctcagaacccagttctgga
cttctaagtcgttggttgtcttctcattatcatggtggtgtacacgatgaaaagtctgtt
gcacgtcacacggtgaacttactcacatcaacaataaaagttgatgcagatcaatcagat
ctgagattttgcttcaggataatttcaccagcgaagaattacaccttgcaggcagagagt
gcaacagagcaaatggattggattgataaaataactggagttattgcatctttactgagt
tcccaggaacccgagaagcattttgctgcaagccccagtagtgaaagtagttccatcgga
agtccagattatgatcacgggacaattgaagaacattcctctgataaggaatttgcttct
aggaacttgatacgttcatcaaaaagtgcactgcagctacatcatagtatgaaaattgat
aagccagttgatacattaaaaagattacctgggaacgatgtgtgcgctgattgtggtgcg
cttgaaccagactgggcttccctgaatcttggtgtcctaatctgtatagagtgttctggt
gttcaccgaaaccttggggtacatatatcaaaggtgagatccttagctctcgatgtgaag
gtctgggaaccttctgtgatagcgttgttccaggccttggggaacgtctttgtgaattca
atatgggaggggctgttgaatgcaagaaaaacttttcaggctgatgaaataccaaggcgg
ttctttgagtctgataaacacaaacagtttttcagtaaacccagtcatgatgatcatatc
tcagttaaggagaagttcattcatgcaaagtatgcagaaaaacgttttgttcagaaagtt
aacgacagtaagcatcttctttcagttgccgaacaattgtgggaaagtgttcgcatgaat
gataagaaatcagcataccgcctcattgtcatatgtgaagtggatgtaaacgcaatcctt
aggcaagcctcacttactacaccattaagtctagccaagccaatgagattgcaggatcat
gcaaatgctcatcagaactttgacaatatggatggtggttctgtactatctgcaaatgca
gaaagcattagtcatagtcagttcattaattatcttcttgatggctgttccttgcttcac
ctggcctgccaaattgctgatgtcagtatggtagagttgctcctacaacatggtgcaaat
ataaattcttgtgattcaaggggtcaggcaccattgcatcatgctataataagaggaaga
attgcaattgtcaagcttctgcttactaggggagctgacccgcaagctccagataaggaa
ggtaaaacacctttacagcttgttaaagaatctgacctcgatgatgttgagataattgct
gtcttgaaaaatgctagcagatag
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