Coffea arabica (coffee): 113739691
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Entry
113739691 CDS
T11342
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
carb03110
]
113739691
Chaperones and folding catalysts [BR:
carb03110
]
Heat shock proteins
HSP100
113739691
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
NBD_SMAX1
AAA_18
AAA_14
NACHT
Mg_chelatase
AAA_28
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
113739691
NCBI-ProteinID:
XP_027122790
UniProt:
A0A6P6XIP3
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All DBs
Position
4c
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AA seq
923 aa
AA seq
DB search
MARAIVQSTNVSSLVAPGRYGQFKGSGKNKRAVMMLCSLHVAPLRMRGFSGLRTSNALDM
MVKTGQSLHSKVAIATSSRRGRGSRMAPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESAEAVA
AGLGGGSSSNKMPTLEEYGTNLTKMAEEGKLDPVVGRQEQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLP
DKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD
LKAQISALVDKSKEMSKAETEAGDGGPLVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKM
EETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKDIADIMLKEVFDRLKKKEI
ELQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSLAEKMLAREIKEGDSVIVDVDSD
GNVTVLNGTSGAPPESLPEPIAV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctagagcaatagtgcagtctactaatgtgtcatctttggttgctcctggaagatat
ggccagtttaaaggttccggtaaaaacaaaagagcagttatgatgctctgcagtttacat
gttgcacctcttaggatgaggggtttctcaggattgcggacatccaatgctttggatatg
atggttaaaaccgggcagagcttacattcaaaagtggccattgctacgtctagtaggcga
ggaaggggtagccggatggcaccaagggcaatgtttgagcggttcaccgagaaagcaatt
aaagtgataatgcttgcgcaagaggaggccagacggttaggccataattttgtaggcact
gagcagattttattgggtcttattggtgagggtacgggtattgctgcaaaggtcctaaaa
tcgatgggcattaatttaaaagatgcacgtgtggaagttgaaaagataattggaaggggt
agtggattcgtggctgtggagatcccctttactccgcgtgcaaagcgagtgttggagctc
tcactggaggaggcccgccaacttggccataactatattgggtctgagcacctattgctg
ggtttgctgcgtgagggtgaaggtgtagcagcacgtgttctcgagaacttgggtgctgac
ccaagtaacattcgcacacaggtcattagaatggtgggtgagagcgcagaagctgttgct
gctggtcttggaggtgggagttccagcaacaaaatgcctactcttgaggagtatgggaca
aatttgacaaagatggctgaggagggcaaactggatcctgttgttggaaggcaggagcaa
attgaacgtgttactcaaattttgggtcgaaggacaaagaataacccctgccttattgga
gagcctggtgtggggaaaacagctattgcagagggccttgctcaacggattgcaaatggt
gatgtacctgagacaatagaagggaagaaggttatcactttggacatgggactcctagtg
gctggaacaaaatatcgaggagagtttgaggaaaggctgaagaaattgatggaggagatt
aaacaaagtgatgaaatcatacttttcattgatgaagtgcacacactcattggagctgga
gcagcagagggggcaattgatgctgcaaacattttaaaacctgctctagctcgtggtgaa
ctacagtgtattggagctacaacacttgatgaatacagaaagcacattgagaaagatcct
gcattggagaggcgtttccaaccagtcaaggtacctgaacccacagtggatgaaactatt
cagattttgaaggggcttagggagcgatatgagatccatcacaagcttcgttacactgat
gaggccttagtttcggcagcccagctttcataccaatatataagtgaccgctttttgcct
gataaagcgattgacttggttgatgaggcgggttctcgtgttcgacttcgtcatgctcag
cttcctgaggaagctagagagcttgagaaagaacttagacagattacgaaggagaagaat
gaggctgtccgcggtcaggactttgagaaggctggtgagttacgtgacagagaaatggat
cttaaggctcagatttcggctctcgtagacaaaagtaaggagatgagcaaggcagagact
gaggcaggggatggtggtcctcttgtgacagaagtggacattcagcacattgtctcttca
tggactggaatacctgtcgagaaggtgtcaactgatgagtcagatcgcctcctcaagatg
gaagagacactacacacacgggtcattggtcaagacgaagctgttaaagccattagccgt
gccattcgtcgtgctcgtgttggactcaagaatcccaaccgaccaattgctagtttcatc
ttttctggtcctactggggtggggaagtcagaactagcaaaagccctggctgcttactac
tttggttctgaggacgctatgatcaggcttgatatgagtgagttcatggagagacacaca
gtttccaagcttattggttcacctcctggatatgttggttacactgaaggtggtcagctg
actgaggctgtgcgtcgtcgcccatatactgttgtgttgtttgatgaaattgagaaggct
catcctgatgttttcaacatgatgcttcaaattcttgaagatggaaggttgacagacagt
aaaggcagaactgttgactttaagaacacccttctgattatgacatccaatgttggaagt
agtgtgattgagaagggtggccgacgcataggttttgatttagattatgatgagaaagat
agtagttacaacagaattaaaagcttggtaacggaggagttaaaacaatatttcaggcca
gaatttctgaatagattggatgagatgatagttttccggcagcttactaagctggaagtg
aaggacatagccgacattatgttaaaggaggtctttgacaggttgaagaaaaaggaaata
gagcttcaggttacagagaggtttagagatagagttgtcgaggaaggttacaacccaagc
tatggagcaaggccactaagaagggcaatcatgagactcttggaggatagcctagctgag
aagatgcttgcgcgtgagattaaagaaggagattcagttattgtcgatgtggattcagat
ggcaatgttaccgttctcaatggcaccagtggtgctccaccagagtcattgccagagcca
attgctgtgtag
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