Coffea arabica (coffee): 113739842
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Entry
113739842 CDS
T11342
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113739842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113739842
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113739842
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
113739842
NCBI-ProteinID:
XP_027123002
UniProt:
A0A6P6XAM7
LinkDB
All DBs
Position
4e
Genome browser
AA seq
1488 aa
AA seq
DB search
MAWRNEIVMRDVFNAGLAISNCISRDVGSQLDLEEALEASRYASHPYTAQPREWPPLVEV
VDTWELPPVLIERYNASGGEGTALCGIFPDIRRAWASVDNTLFIWRFDKWDGQCPEYSVD
EQAICAVGLAKAKPGIFVEAIQYLLILATPAELILLGVCCSGRGDGSDPYAEVVLQPLHE
YRIPSDGVTMTCITCTDWGRIFLSGRDGHVYEMQYTTGSGWQKRCRKVCVTAGLGSVISR
WVVPNVFKFAAVDPIVEMVADNERHILYGRTEQMKIQVFSLGPGGDGPLKKVAEERNLIS
QKDPSYGGRQPTGSRLPSRSNKTSMVSISPLSILESKSLHLVAVLSDGRRMYLTTGPSGG
NSGSLGGLGGLGSNLQRPSCLKVVATRPSPPLGVGSGLAFGAMALSGRSQNEDLSLKIES
GHYSAGALVLSDSSPSTSSSLLIVNRDSSTQASSTGLVAGVRSTRALRELVSSLPIEGRM
LFVADVLPHPDTAAIVQSLYLQLEFCGFDGTWESSEKASRKLWARGDLSTQHILPRRRIV
VFSTMGMMEIVFNRPVDILRRLLESSSPRSLLEDFFNRYGAGEASGMCLMLAARIVCAET
LISNIVAEKAAEAFEDPRLVGIPQLEGSGALSNTRTPAGGFSMGQVVQEAEPVFSGAYEG
LCLCSSRLLLPLWELPVFIAKSGTSSSDMVVICRLPVGAMQVLEDKIRSIEKFLSSRRNQ
RRGLYGSVAGLGDVTGSILIGTGSDMGVGDRSMVRNLFGSYSRNVETSEGGSSAKRQRLP
YTSAELAAMEVRSMECIRQLLLRCSEALFLLQLLSQHHVTRLISNFDANTRQAVVQLTFH
QLVCEEEGDKLATRLIASLMEYYTGPDGRGTVDDISGRLRDGCPSYFKESDYKFFLAVEC
LERAAATFDAEERENLAREAFNYLSKVPESADLRTVCKRFEDLRYYEAVVRLPLQKAQAL
DPAGDALNEQKDVRDFALAQREQCYEIIASALRALKGDNSPKEFGSPIKPVAQSALDQGS
RKKYISQIVQLGVQSSDRVFHEYLYRTLIDLGLEDELLEYGGPDLVPFLQSAGREPSQEV
HAVLAVTSSTSPLGQSRLPIALHQAKYLELLARYYVLKRQHILAAHVLVRLAERRSTEGG
YAPTLEQRRQYLSNAVLQAKSATEVDNTSVSARGSLDNGLLDLLEGKLTVIQFQIKIKEE
LEAMASRLEASPSTVNSVSNDSQQEQSTSPNADLIRTISEKAKELSLDLKSITQLYNDYA
VPFELWEACLEMLYFASYSGDADSSIVRETWARLIDQALSKGGIAEACAVLKRVGSRLYP
GDGAVLPLDTLCLQLEKAALERVVSGVESVGDEDIARALLAACKGAVEPVLNTYEQLLSN
GAILPSPNLRLRLLRSVLVVLREWAMSVFAHRMSTSATGASLILGGTFSFGQTTTINQGV
RDKISSAANRYLTEVRRLPLPQSQTEAVSRGFRELEESLQSHFPFDRF
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggaggaatgagattgtgatgcgtgacgtgtttaatgctgggcttgccatcagc
aactgtataagcagagatgttggctctcagcttgacctggaagaagctctggaagcttct
agatatgctagtcatccctatactgctcaacccagagagtggccccctttagttgaagtt
gtggatacttgggagttgcctcctgtcctcattgaaagatacaatgcatctggtggagag
ggaacagctttatgtggaatatttccagacatacgcagagcatgggcatcggtggataac
acgttatttatctggcggtttgacaagtgggatggacaatgtcctgaatatagtgtggat
gaacaagccatttgtgctgttggcttagctaaagccaagcctggcatttttgttgaggcc
atccaatatctcctcatattggccactcctgctgagttgatccttttaggtgtttgttgt
tctgggaggggtgatggcagtgatccatatgctgaggttgtgcttcagccgttgcatgag
tatagaattccatctgatggagtgacaatgacatgtattacttgcactgattggggtcga
atttttctttctggtcgtgatggccatgtttatgagatgcaatataccactggttccggt
tggcagaaacgttgtcgtaaagtttgtgtaactgcaggtttgggaagtgtcatttcaaga
tgggttgtgccaaatgtgtttaaatttgcagctgttgatcctattgttgaaatggttgcc
gataatgagagacatatactctatggaaggactgaacagatgaaaatccaagttttctca
ctgggcccaggaggggatgggccacttaagaaggttgcagaggagagaaatttgatcagc
cagaaagatccatcctatggtggcaggcagccaacagggtcaaggcttccttctcgatca
aataagacatctatggtttcgatatcacctttgtctatcttagaatcaaagtcgcttcat
ctggtcgctgttttatcagatggaagaaggatgtaccttacgactgggccatcaggtgga
aatagcggttcccttggaggtttgggtggtcttggaagcaatcttcagagaccaagttgt
ttgaaagtagttgcaaccaggccttctcctcctttgggtgtgggtagtggtcttgcgttt
ggagccatggccctctctggtagatctcagaatgaagatctatcgcttaagatagaatca
ggtcattattcagctggagctcttgttctttctgattcatcgccatcaactagttcttct
cttctaattgtcaacagggattcaagcacacaagcttcatccactggtttggtagctggt
gttcgaagcactcgtgcactaagggagttggtctcatcccttcctatcgaaggtagaatg
ctttttgtggcagacgtactacctcatccagatacagctgccattgtgcagtctttatat
ttacaactagaattctgtggatttgatggtacgtgggaatcctctgaaaaggcatctcga
aagctctgggcgagaggtgacctttcaacccaacatatactgccaagaaggagaattgtt
gttttcagtaccatgggcatgatggaaatagtatttaacagaccggttgacatcctgaga
aggttgttggagtcaagctcaccaagatcactgttggaggacttcttcaaccgttatgga
gctggggaggcatctggaatgtgtttaatgctggctgccagaatagtctgtgctgaaacc
ctcataagcaatatcgttgctgaaaaagcagctgaagcttttgaggacccaagactagtt
ggaataccccagttagaaggcagtggtgcattgtcaaacacacgaactccagctggtggt
tttagcatgggacaggttgttcaagaagctgagcctgtattttcaggtgcttatgaaggg
ttgtgcctgtgttcatcaaggttacttttaccattgtgggagctcccagtatttattgca
aaaagtggcacaagttcttcagacatggttgtaatatgcagactccctgttggggcaatg
caagttctcgaagataaaatccgctctatcgagaagtttttaagttcacgaaggaatcag
agaagagggctttatggttctgttgctggtctgggggatgtgactggttcaattctgata
gggactggttcagatatgggtgtgggtgatagaagtatggttcgaaatttatttggttct
tattctcgtaatgttgaaaccagtgaaggtggatcatcagctaaaaggcagcgacttcct
tatacttctgcagaactagctgccatggaggtgagatcgatggaatgtatcagacagttg
ctgctcagatgcagtgaagccctctttcttctccaacttctttcacagcatcatgtaaca
cgcctgattagtaattttgatgcaaatactaggcaagctgtagttcagttaacatttcat
caactagtttgcgaggaagagggtgacaaactcgctacaaggcttatagcgtctctgatg
gagtattacactggtcctgatggcaggggtacagttgatgatattagtggcagactgcgg
gatggttgtccaagctatttcaaagagtctgattataaattctttcttgctgttgaatgt
cttgagagagctgcggctacttttgatgcagaggagagggaaaacctggctagagaggcc
ttcaattacctgagcaaagttccagagtctgcagacctacgtactgtgtgcaagcgtttt
gaagatttgaggtattatgaagctgttgttcgtttacctttgcaaaaggcacaggctttg
gatcctgctggtgatgctttgaatgagcaaaaagatgtcagggattttgcgcttgcccaa
cgtgagcagtgttatgaaattattgccagtgctttgcgtgccttaaaaggtgataattca
ccaaaggaatttgggtctccaataaaacctgttgctcaatctgcacttgatcaaggctct
cgtaaaaagtatatatcccagatcgtccaacttggtgtccagtcatctgatagagttttt
cacgagtatctatatcggacattgattgatctaggcttggaagatgagttgttggaatac
ggaggccctgatttggtgccttttttgcaaagtgctggtcgtgaaccttcacaagaggtt
catgctgttttggcggtgacatcttctacttctccacttggacagtcaaggttgcctatt
gcacttcatcaagcgaaatatcttgagcttctggcacgatattatgttttgaaaagacag
catattcttgctgctcatgtgttggtaagactggccgaaagacgctcgactgagggtgga
tatgctcctactctggaacaaaggcgtcagtacctgagtaatgccgtgcttcaggcaaag
agtgccactgaagttgataatacgagtgtttcagcacgaggctctcttgacaatggactt
ctggatttgcttgaaggaaagcttactgttattcagttccaaatcaaaatcaaagaggaa
ctagaggctatggcctctagattagaggcttctccaagcacagtcaactccgtttcaaat
gactcacaacaagaacagagcacctcccccaatgctgatttgatccgtactatatcagaa
aaggcaaaagagttgtccttggatttgaagagcatcactcagctatataatgattatgct
gttccatttgagctctgggaggcatgtctggaaatgctgtactttgctagctattctggt
gatgctgatagtagcatcgtgagggagacctgggccagactcattgatcaagctctttcg
aagggtggcattgccgaagcttgtgcagtattaaagagggttggctcccgtctttatcct
ggggatggagcagtcttaccattagacacattgtgtctacagcttgagaaggctgctttg
gagcgagtggtttcaggggttgaatctgttggagatgaagatattgcaagagctctatta
gctgcttgcaaaggtgcagtagaacctgtattgaatacttatgaacaattgttatcaaat
ggagcaattttaccatctccaaatttgaggttacgccttcttcgctcggtgctcgtggtg
cttagagagtgggcaatgtccgtttttgcacataggatgagtacaagtgctactggagct
tctttaatccttggtggaacattttcctttgggcaaaccacaaccattaaccaaggggtt
cgtgataagattagtagtgccgctaacaggtacttgactgaggtcaggagactgccactg
ccacagagtcaaactgaagcagtctctcgaggtttccgagagcttgaagaatcactgcaa
agtcattttccatttgaccgtttttga
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integrated database retrieval system
