Coffea arabica (coffee): 113739859
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Entry
113739859 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113739859
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113739859
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113739859
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
113739859
NCBI-ProteinID:
XP_027123042
UniProt:
A0A6P6XAR9
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Position
4c:complement(10017747..10023989)
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AA seq
432 aa
AA seq
DB search
MGGKSSKSSTSGRYSSYSSSSNSWGNYGSPHSQYPQPGYNYAPQPSYNYAPAPPPQESRR
RLERKYSRIDDDYTSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFHRKSLHHLG
DGQNPYEQAISIIGRTLSKFDEDNLIPCFGFGDASTHDQEVFSFYPDERFCDGFEEVLSR
YRELVPQLRLAGPTSFAPVIEMAMTIVEQSGGQYHVLLIIADGQVTRSIDTGRGQLSPQE
RKTVEAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKNVDR
SRKEAEFALSALMEIPSQYKATLELEILGVSKGNGMDRVPLPPPLYGPASLGTPKTSRNS
SFRPSAPSCGPEPPFARSQAASSSDSHLCPICLTDPKNMAFGCGHQTCCECGQDLQLCPI
CRDTISTRIKLY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcaagagttcgaagagctcgacttctggtcgatactcatcttacagttccagt
tcaaattcatggggtaattatggcagtccacactcgcagtaccctcaaccaggttacaat
tatgcacctcaaccaagttacaattatgcacctgcacctccaccccaggagtcgaggaga
cggcttgagaggaaatattcaaggatagatgatgactacactagtttggaacaggttact
gacgctcttgcacgtgctggcctggaatcatcaaatcttattgttggtattgatttcacc
aaaagcaacgagtggacaggtgctaggtcattccacagaaaaagtttacatcaccttgga
gatgggcaaaacccatatgaacaggccatatcaattattggaaggacactatccaaattt
gatgaggacaatctaattccatgttttggatttggagatgcttcaacgcatgaccaagaa
gttttcagcttctatccagatgagcgattttgtgacggctttgaggaagtattgagccgc
tatagagaattagttccacaattgcgacttgcaggaccaacatcctttgctccagtcatt
gagatggccatgactatcgttgagcaaagtggtggacagtaccatgtcttactgatcata
gcagacgggcaggtgacaagaagtatagatactgggcgtggtcaattaagcccacaggaa
aggaaaactgttgaggcaattgtgaaagcaagtgagtaccctctatcaattgttttggtt
ggggttggagatggaccatgggatatgatgagggagtttgatgataatatccctgctcgt
gcctttgacaattttcagtttgtaaattttacagagataatgtcaaagaatgtggacaga
tccaggaaagaggctgagtttgctctttcagcgttgatggaaataccttctcagtataaa
gcaacgctggagctcgaaatattgggtgttagcaaggggaatggcatggatagggttccc
ctcccccctcctctctacggtccagcctctcttggcacgccgaaaacttcaagaaacagc
agttttcgtcctagcgcaccttcttgtggacctgagccaccttttgcaaggagtcaagca
gcaagttcttctgatagccatctgtgtcccatatgccttactgatccaaagaacatggcc
tttggttgtggacatcagacatgctgcgagtgtgggcaggaccttcagttgtgcccaatt
tgccgggataccataagtacaaggatcaaactttactga
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